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SCNpilot_expt_1000_bf_scaffold_5381_7

Organism: SCNPILOT_EXPT_1000_BF_Devosia_65_23

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(4438..5661)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbI n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWE4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 406.0
  • Bit_score: 755
  • Evalue 2.10e-215
  • rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EJU15035.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 406.0
  • Bit_score: 755
  • Evalue 3.00e-215
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 409.0
  • Bit_score: 683
  • Evalue 5.50e-194
  • rbh

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGAGCGAGAGTGATCCCCGGAAGGAGGAAGTGCCGGACGACGACGCGCAGCCGCTGACCGGCGAGCCGGCCGGTCCCGCGCCGATGCGCCTGCGCGCCGAGCCGCCGCGCGTGACACGACTGTCGCGGAAGGTGCTGGCCGGCATCGGCCTGGTCGCCAGCGTCGGGCTCGGCGGAGCCTTGATCTATGCACTCCAGACCCGGGACGGCGGTCGGTCGAACGAGGAACTCTATTCGACCGAAAACCGGTCGACCGCTGATGGCCTTGCAGGTCTGCCGCGCGACTACAGCGGGGTGCCGCAGCTCGGTCCGCCGCTTCCCGGCGATCTCGGCCGTCCGATCCTTAGCACCCAGGATCGTGGGCAGCCGGTGCCCTCACCCGGCGTCGCCGCCCCCAATCCCGGTATCAGCCCGGAAGAGCAGCGCCGCCTTCAGGAAATCGAGACCGCACGTACCAGCCGCCTTTTCTCCGGAACCGAGACCCGCGCTGGAGCGGCGGCGGCGGCGGCGGCCATCGTCCCGCCGCCAGCGCCGGACCTGGCGAGCCTCGGCCTTGCGCCTCCGCCAGCAACGCCCTCGGCGCAGGATCGCCAGAACGCATTCCTGAACGCGGCAGCCGATCGGAGGACGGTGGCGCCTGATCGCGTCGCGGCGCCGGCGTCACCCAACATCCTTCAAGCTGGCGCGGTGATCTCAGCAGCACTGATCACCGGCATCCGGTCGGACCTTCCCGGCCAGATCACCGCCCAGGTGACAGAGAACATCTACGACAGCCCGACAGGTCGCATTCTGCTCGTGCCGCAGGGGACGCGTGTCATCGGCCAGTACGACAACAATGTGCAGTTCGGGCAGAGCCGCGTGCTGCTGGTCTGGAATCGGCTCATTCTCCCCAACGGCCGCTCGATCGTTCTCGAGCGCCAGCCAGGTACTGACGCCGAGGGCTATGCCGGCTTGCAGGATGGTGTTGATTATCACTGGTGGGATCTCGCCAAAGCTGCCGGGCTTTCGACGTTACTCAGCGTCGGGGCTGAACTCGCGGTCGACAATGACGATCGCCTGATCCAGGCAATCCGCAATGGCGGCCAGGACACTATCAATGACGCCGGCCAGCAGATCGTGCGCCGTCAGCTCAACATTGCGCCGACACTGACGATCCGGCCGGGGTTCCCAGTGCGTGTGATCGTGACCCGCGACCTCGTCCTCGAACCCTATGGAGGATCATAG
PROTEIN sequence
Length: 408
VSESDPRKEEVPDDDAQPLTGEPAGPAPMRLRAEPPRVTRLSRKVLAGIGLVASVGLGGALIYALQTRDGGRSNEELYSTENRSTADGLAGLPRDYSGVPQLGPPLPGDLGRPILSTQDRGQPVPSPGVAAPNPGISPEEQRRLQEIETARTSRLFSGTETRAGAAAAAAAIVPPPAPDLASLGLAPPPATPSAQDRQNAFLNAAADRRTVAPDRVAAPASPNILQAGAVISAALITGIRSDLPGQITAQVTENIYDSPTGRILLVPQGTRVIGQYDNNVQFGQSRVLLVWNRLILPNGRSIVLERQPGTDAEGYAGLQDGVDYHWWDLAKAAGLSTLLSVGAELAVDNDDRLIQAIRNGGQDTINDAGQQIVRRQLNIAPTLTIRPGFPVRVIVTRDLVLEPYGGS*