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SCNpilot_expt_1000_bf_scaffold_339_6

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 47 / 55 BSCG 44 / 51 ASCG 11 / 38
Location: comp(6247..7110)

Top 3 Functional Annotations

Value Algorithm Source
mutM2; formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 287.0
  • Bit_score: 466
  • Evalue 7.40e-129
DNA lyase n=1 Tax=Microbacterium RepID=UPI000380B25A similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 287.0
  • Bit_score: 504
  • Evalue 6.00e-140
  • rbh
DNA glycosylase/AP lyase, H2TH DNA-binding protein {ECO:0000313|EMBL:EIC08947.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 287.0
  • Bit_score: 498
  • Evalue 4.60e-138

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCCCGAGATGCCGGAGGTGCAGGGACTCGTCGACTTCCTCGCCGAGCGTGCCACGGGTGTCACGATCACGAAGGCGGCCGTCGCGAACATCGCCGCACTGAAGACCTACGACCCGCCGATCGACGCGCTGAAGGGCACGACGATCACGGGGGCCGCGCGCCACGGCAAGTTCGTGGACCTATCGACGGATGCCGGCACGCACCTCATCTTCCACCTGGCGAAGGCCGGCTGGTTGCGCTGGTACGAGCAACTGCCCGCGACCGTCATCAGACCGGGCAAGACCCCGATCGCACTGCGCGTCGGCCTGGATGACGGCGCGGGGTTCGATCTCACCGAAGCCGGCACGAAGAAGTCGCTCGCGGTCTACGCCGTGCGCGACCCGCAGGACGTGCCTGGCATCGCACGCCTCGGCCCCGATCCGCTCGGTGACGACTTCACCCGCGACGCATTCGCCGAGTTGCTGGCCGGCCGCCGCACGCAGATCAAGGGGGTGTTGCGCGACCAGTCCAACGTGGCGGGCATCGGCAATGCGTACTCGGATGAGATCCTGCACGCGGCGAAGATGTCGCCGTATGCCCTCGCCGCAACGCTCGGCGATGACGAGGTGACGAGGCTCTACGACGCGCTGCGGGCGACGCTGACGGATGCCGTGGCGCAGGCATCCGGCAAGCCGCCGGCCGATCTGAAGGATGCCAAGCGCCGCGGCATGGCCGTCCACGGGCGCCGCGGTCAGGCCTGCCCCGTGTGCGGCGACGAGGTGCGTAGCGTCTTCTTCGCCGACAACTCGCTCGAGTACTGCCCGACGTGTCAGACGGGTGGAAAGCTGCTCGCCGACCGGAGGTTGAGCCGGCTGCTGAAGTGA
PROTEIN sequence
Length: 288
MPEMPEVQGLVDFLAERATGVTITKAAVANIAALKTYDPPIDALKGTTITGAARHGKFVDLSTDAGTHLIFHLAKAGWLRWYEQLPATVIRPGKTPIALRVGLDDGAGFDLTEAGTKKSLAVYAVRDPQDVPGIARLGPDPLGDDFTRDAFAELLAGRRTQIKGVLRDQSNVAGIGNAYSDEILHAAKMSPYALAATLGDDEVTRLYDALRATLTDAVAQASGKPPADLKDAKRRGMAVHGRRGQACPVCGDEVRSVFFADNSLEYCPTCQTGGKLLADRRLSRLLK*