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SCNpilot_expt_1000_bf_scaffold_345_6

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5982..7586

Top 3 Functional Annotations

Value Algorithm Source
ABC-type uncharacterized transport system, duplicated ATPase component protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IPK3_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 521.0
  • Bit_score: 655
  • Evalue 3.90e-185
  • rbh
ABC transporter ATPase; K13896 microcin C transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 521.0
  • Bit_score: 655
  • Evalue 1.20e-185
  • rbh
ABC-type uncharacterized transport system, duplicated ATPase component protein {ECO:0000313|EMBL:ADJ64900.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 521.0
  • Bit_score: 655
  • Evalue 5.50e-185

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGCGCGAAGCCGTCCGCCCCGATGCCGCCGCACCGCTGCTGGCGGTCGAGGCGCTCACGGTCGACTTTGTCGGCGCCGGCGCCGCCACGCGCGTGGTCGATGGCATCGACTTCCGCATCGCGCCGGGCGAGAAGTTCGCGCTGGTCGGGGAGTCGGGCTCGGGCAAGACGGTGAGCGCGCTGTCGCTGCTGCGGCTGAATACCGACGCGCGCTACGGCGGGCGCATCCTGTTCGAGGGCCGCGACCTGCTCGCCTGCTCCGAGCGCGAGATGCGCGGCGTGCGCGGGCGCGACATCGCGATGATCTTCCAGGAGCCGATGTCCGCACTCAACCCCCTGTACCCGATCGGCCGGCAGATCTGCGAGGCGATCGAGGAGCACGAGGGGCTCACGCGCGCGCAGGCCACGCGCCGCGCCGTCGAGCTGCTGGCGCGCACGCGGGTGCCCGAGCCGCAGCGCCGCTTCGCCAGCTTCCCGCACCAGCTCTCGGGCGGCCAGCGCCAGCGCGCGATGATCGCCATGGCGCTGGCGTGCCGCCCGCGGCTGCTGGTGGCCGACGAGCCGACCACCGCGCTCGACGTCACCATCCAGCGCCAGATCGTCGCCCTGCTCGATGAGCTGCAGCGCGAGACCGGCATGGCGGTGCTGCTGATCACGCACGACCTGCCGCTGGTGCGCTCGTTCGCCGGACGGGTGGCGGTGATGAAGGACGGGCGCATCGTCGAGCAGGGCGCCACCGCCGAGGTGTTCGCGAACCCGCGCAGCGACTACACGCGGCTGCTCGTCGACAGCCGTCCGCGGCGCTCGGTGGCCGCGCCCGACCCGGGCGCGCCGCCCCTCCTCGAGGCGCGCGCACTGAGCTGCAGCTTCCGCATCGCGCGCGGCTGGTTCGCCGCCCGCCGCTTCGAGGCGGTACGCGAGGTCGACCTGCGCCTGCCGCGCGGACAGACCCTGGGCGTGGTCGGCGAGTCGGGCTCGGGCAAGACCACGCTCGGCCTGGCGCTGCTGCGCCTCGCCCGGAGCGAGACGACCGGCGAGATCCGCTTCGACGGCCAGCGCATCGATGCGCTGCGCCCGCGCGCCCTGCGCGGGCTGCGCCGCCGGATGCAGATCGTGTTCCAGGATCCGTTCAACTCGCTGTCGCCGCGGCGCACCGTGCTGCAGATCGTCGAGGAGGGGCTGGCGCTGCACCGGCCCGAGCTTTCGGCCGGCGCGCGCCGCGACGCGGTGGTGGCGATGCTCGAGGAGGTCGGGCTCGGCGCGGCCACGCTCGGGCGCTATCCGCACGAGTTCTCCGGCGGCCAGCGCCAGCGCGTCTCGATCGCGCGTGCCGCGGTGCTCCAGCCCGAGCTGATCGTGCTCGACGAGCCCACCTCGGCGCTCGACGTCTCCGTGCAGCAGCAGGTGCTGCAGCTGCTGGCCGGGCTGCAGCGCCGGCACGGCCTGGCCTACGTGTTCATCACCCACGATCTGGAGGTGATCCGCGCCATGGCTCACCACGTCGTGGTGATGAAGGACGGGCGCATCGTGGAAGCGGGAGAGACCGAGGCGCTGTTCGCGGCGCCGCGCGAGGCCTACACGCGCGAGCTTTGCAGGAATGTGTGA
PROTEIN sequence
Length: 535
MREAVRPDAAAPLLAVEALTVDFVGAGAATRVVDGIDFRIAPGEKFALVGESGSGKTVSALSLLRLNTDARYGGRILFEGRDLLACSEREMRGVRGRDIAMIFQEPMSALNPLYPIGRQICEAIEEHEGLTRAQATRRAVELLARTRVPEPQRRFASFPHQLSGGQRQRAMIAMALACRPRLLVADEPTTALDVTIQRQIVALLDELQRETGMAVLLITHDLPLVRSFAGRVAVMKDGRIVEQGATAEVFANPRSDYTRLLVDSRPRRSVAAPDPGAPPLLEARALSCSFRIARGWFAARRFEAVREVDLRLPRGQTLGVVGESGSGKTTLGLALLRLARSETTGEIRFDGQRIDALRPRALRGLRRRMQIVFQDPFNSLSPRRTVLQIVEEGLALHRPELSAGARRDAVVAMLEEVGLGAATLGRYPHEFSGGQRQRVSIARAAVLQPELIVLDEPTSALDVSVQQQVLQLLAGLQRRHGLAYVFITHDLEVIRAMAHHVVVMKDGRIVEAGETEALFAAPREAYTRELCRNV*