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SCNpilot_expt_1000_bf_scaffold_357_2

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1359..2384

Top 3 Functional Annotations

Value Algorithm Source
ApbE family lipoprotein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y810_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 340.0
  • Bit_score: 316
  • Evalue 4.70e-83
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 340.0
  • Bit_score: 316
  • Evalue 1.50e-83
ApbE family lipoprotein {ECO:0000313|EMBL:ACB33752.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 340.0
  • Bit_score: 316
  • Evalue 6.50e-83

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGATGCCTTTCGAATCTCCCGCCGCAACCTGGCACGCGCGCTGGCCGCCGCGCCGCTGCTGCCGCTGCCGGTTCTCGCCGCGGCCGCGCCGCTGAATGTTCGCCGCGCGCTGATGGGCACCTGGGTCGACATCACCGTCGCCGATGGAGGCCAGCCCGGCGCGCAGCAGGCCGTCGCGCTGGCGTTCGCGCAGATGGAAAGGCTGGCGCAGCGGATGAGCCGCTTCGATCCGGACAGCGATCTCGGCGTGCTCAATCGGGCAGCCGGCCGGCATGCGGTGCCCGTGCCGCCGGAGATGATGGCGGTGCTGCAGCAGGCGAGGGCAGTGCACCGGCGCACCTCGGGCGCCTTCGATGCCACCGTGGGCGGCCTCACGCCCGGAGCGGCGGCCGCGAGCGGCGGGGTGCCCGACGAGGGTGCAGTGCGCTCGGCATTGGAGCACGTGGGCATGCGGCACCTGACGCTCGACGCGCAGCGGGGCACCGCCCGGATCGACGATCCGATGACGCAGCTCGACCTGGGCGGGATCGCCAAGCTGCCCATTCTCGAGGCGGGGCTGGACGTGCTGCGCGCCCACGGCGTGCGCGGCGCGCTGGTGAACGGCGGCGGCGACGTGTTCGCCTCGGCCCGTCCCGATGGCCGCCCGTGGCGCATCGGCGTGCGCGATGCCGCCGCGCCCGACCAACTGATGGCGGTGGTGCCGCTGCACGAAGGGGTGGTGGCCTCGTCGGGCGACTACGAGCGCTTCGTGATGCACGAGGGCCGGCGCTATCACCACGTGATCGACCCGGCCACCGGCAGGCCGACGCGCGGCATTCACGGCGTCACGCTGGTGGCGCGGCGCGCCGCCGACGTCAACGGCCTCGGCACCGCCGCGATGGTCGCCGGCCCGCTGCGCGCCGCGGCGCTGCTCGAGCGCTGCGGCGTCGATCAGGCGCTGTTCGTGCGCGAGGACGGCGGCGCGTGGATTTCCTCAGCCCTCGCGCGCCGCATCGAGCCGCTCATGAGCGGTGATAGGCCGTGA
PROTEIN sequence
Length: 342
MDAFRISRRNLARALAAAPLLPLPVLAAAAPLNVRRALMGTWVDITVADGGQPGAQQAVALAFAQMERLAQRMSRFDPDSDLGVLNRAAGRHAVPVPPEMMAVLQQARAVHRRTSGAFDATVGGLTPGAAAASGGVPDEGAVRSALEHVGMRHLTLDAQRGTARIDDPMTQLDLGGIAKLPILEAGLDVLRAHGVRGALVNGGGDVFASARPDGRPWRIGVRDAAAPDQLMAVVPLHEGVVASSGDYERFVMHEGRRYHHVIDPATGRPTRGIHGVTLVARRAADVNGLGTAAMVAGPLRAAALLERCGVDQALFVREDGGAWISSALARRIEPLMSGDRP*