ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3408_9

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7715..8383)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative coupling factor TraD n=4 Tax=Proteobacteria RepID=N6YBX2_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 7.70e-119
Conjugative coupling factor TraD {ECO:0000313|EMBL:EPL63915.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 1.10e-118
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 222.0
  • Bit_score: 421
  • Evalue 2.10e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GGCGCTGCGACCGGCGCGAAGGTGCCGATCAACGTGCACGCCGACGAGTTCAACGAACTCATGGGCGACGAGTTCATCCCGATGGTCAACAAGGGCGGCGGTGCAGGCGTGCAGGTCACGGCCTACACGCAGACCCTCTCGGACATCGAGGCGCGCATCGGCAATCGTGCGAAGGCGAGCCAGGTGGTGGGCAACTTCAACAACCTGTTCATGCTGCGCGTGCGCGAGACCGCCACGGCCGAGTTGCTGACGCGGCAACTGCCCAAGGTCGAGGTCTACACGACGACGGTGATGAGCGGCGCCACCGACAGCTCCGATCCGACCGGCAACACTGCGTTCACGTCCAACACGCAGGACCGCATCAGCAGCAACAGCGTGCCGCTGATCGAACCGGCGCATGTCGTGGGCCTGCCCAAGGGGCAGTGCTTCGCGCTGATCGAGGGCGGCCACCTGTGGAAGGTGCGCATGCCCTTGCCGGCGCCCGACCCCGACGAAGCCATGCCCAAGGATCTGCAGGAACTGGCCGGCTACATGCGGCAGCACTACGTCGAGGCCGGTGACTGGTGGGATAACAACTGGCTCCCTGGCTTGCAAGACCAGCCGCTGCCCGACGATCTGCTGGCGGGCTTCAAGCAGATGGCGAGCATGGACGAAGGAACCATCGCATGA
PROTEIN sequence
Length: 223
GAATGAKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKASQVVGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTVMSGATDSSDPTGNTAFTSNTQDRISSNSVPLIEPAHVVGLPKGQCFALIEGGHLWKVRMPLPAPDPDEAMPKDLQELAGYMRQHYVEAGDWWDNNWLPGLQDQPLPDDLLAGFKQMASMDEGTIA*