ggKbase home page

SCNpilot_expt_1000_bf_scaffold_378_12

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(10128..10511)

Top 3 Functional Annotations

Value Algorithm Source
Hpt protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2H5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 119.0
  • Bit_score: 134
  • Evalue 7.20e-29
Hpt domain protein {ECO:0000313|EMBL:CEG07382.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 119.0
  • Bit_score: 134
  • Evalue 1.00e-28
two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 122.0
  • Bit_score: 130
  • Evalue 4.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCTGCCGTATCTCACACAGGTTCCCTGGATGCCGTCTCCGCCTCTGGCCCCGGATCAGTTCCCCATCGATGTCGCGCATCTGCGCCGCATGACGCTGGGGGAGCGGGATCTGGAGCGCGAGGTTCTGACGATGTTCAAGGCGCAGTCCGGACAGATGCTCGCCCGGCTCGTCGCATTGCCGGCCGACGCCACCCAGTTGGCGCATACATTGAAAGGCTCGGCGCGTGCCATCGGCGCCTTCGCGGTTGGCGATGCCGCTCATGCGCTCGAGGGCGCGTTGCGCCAGCAGTCCGGCATCGCGGATGCGGTGCGCGCACTGACCCATGCGGTGGCCGATGCGCGCGATGCCGTGGATATCCTTCTTGGTGAGATTCACCACTGA
PROTEIN sequence
Length: 128
MLPYLTQVPWMPSPPLAPDQFPIDVAHLRRMTLGERDLEREVLTMFKAQSGQMLARLVALPADATQLAHTLKGSARAIGAFAVGDAAHALEGALRQQSGIADAVRALTHAVADARDAVDILLGEIHH*