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SCNpilot_expt_1000_bf_scaffold_1118_30

Organism: SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27

near complete RP 51 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 35960..36694

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein id=12495862 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 172.0
  • Bit_score: 113
  • Evalue 3.30e-22
CBN-RGR-1 protein {ECO:0000313|EMBL:EGT33749.1}; TaxID=135651 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis brenneri (Nematode worm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 170.0
  • Bit_score: 75
  • Evalue 1.10e-10
hypothetical protein; K11095 U1 small nuclear ribonucleoprotein C similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 147.0
  • Bit_score: 72
  • Evalue 2.00e-10

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Taxonomy

Caenorhabditis brenneri → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 735
ATGCACCCCCGCACCCTCGCCCTTGCAGTTCTCGTCCTCGGAACCGGCAGCGCCCACGCCCAGTTCGGCATGGAGCAGATGATGAATCCGATGGCCATGATGAATCCCATGACGATGATGAATCCCATGAGCATGGCCAACCCGATGGCCATGATGAACCCCATGACGATGATGAATCCCATGAGCATGGCCAACCCGATGGCCATGATGAACCCCATGACGATGATGGCGCCGATGGGCATGATGGCCGCCCCCATGGTGATGCCGCTGGGCGCCAACATGATGTCGGCACAGACCTTCGCCTCACCGCAGGCGCAGATGAATCCGTATCTCAACCCGATGGCGGCCGGCAACCCCTACCTCAACCCGTATGCCGGCGCAGGGGCGCAATTCCCGGGCATGCCGTTCCCGGGCATGCCGCCCGCCGGCTACGGCTATGGCGCCCCGGCGGCGCCGCAGGGCTTCTTCGGTATGCCGGGCATGCCTGGTATGCCTGCGGGCATGCCCGCCGCACCCGCCTACGGTGCGTTCCCGGCGCAGGCCGCGCCGCTGCCGCTCTTCCCGATGCCGGGCGCGCCCGTAGCCAGCGCGCCGGTGGCCCCCGCCGTCGCACCGGCGCCCGCGATGAACCCGTTCGACCCCAGCTTCTGGATGCAGATGATGGGCGGCATGCAGCCGCCGGTCGCCGCGCCCGCTGCGGTCGCGCCAACACCGACGCCGGCGCCAGCGCAATAG
PROTEIN sequence
Length: 245
MHPRTLALAVLVLGTGSAHAQFGMEQMMNPMAMMNPMTMMNPMSMANPMAMMNPMTMMNPMSMANPMAMMNPMTMMAPMGMMAAPMVMPLGANMMSAQTFASPQAQMNPYLNPMAAGNPYLNPYAGAGAQFPGMPFPGMPPAGYGYGAPAAPQGFFGMPGMPGMPAGMPAAPAYGAFPAQAAPLPLFPMPGAPVASAPVAPAVAPAPAMNPFDPSFWMQMMGGMQPPVAAPAAVAPTPTPAPAQ*