ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1512_7

Organism: SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27

near complete RP 51 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(5044..5307)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F4BB similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 87.0
  • Bit_score: 145
  • Evalue 2.80e-32
30S ribosomal protein S20P; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 87.0
  • Bit_score: 139
  • Evalue 4.80e-31
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 88.0
  • Bit_score: 143
  • Evalue 1.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCGAACTCCGCCCAGGCCCGCAAACGTGCCCGTCAGGCCACCGCGCAGCGCACCCGCAACATGAGCCAGCGCTCGGAACTGCGCACCGCGATCAAGAAGGTGCGCAAGGCCATCGCCGCCGGCGACAAGGCAGCCGCGCAGGGCGTCTTTCAGGCCTCGATGAGCGTGATCGACCGTATCGCGGACAAGGATATCGTGCACAAGAACAAGGCCGCCCGCCACAAGAGCCGCCTGTCCGGCGCGATCAAGGCCATGGCCTGA
PROTEIN sequence
Length: 88
MANSAQARKRARQATAQRTRNMSQRSELRTAIKKVRKAIAAGDKAAAQGVFQASMSVIDRIADKDIVHKNKAARHKSRLSGAIKAMA*