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SCNpilot_expt_1000_bf_scaffold_213_13

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 12350..13231

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035DD133 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 292.0
  • Bit_score: 208
  • Evalue 9.00e-51
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KGG85579.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 295.0
  • Bit_score: 207
  • Evalue 2.80e-50
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 290.0
  • Bit_score: 199
  • Evalue 1.70e-48

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGATGTTCGGCATTTGCGATATTTCTTGGCGTTGGCAGAGGAATTGCATTTCGGACGGGCGGCTGCCCGTGCCCACGTCGAGCAGTCTCCGCTGTCGCGGACCATCACGCAGCTGGAGGACGAACTGGGGGTCGTACTACTGAACCGCTCGCGCCAAGGCAATACGCTTACGCCCGCCGGCCAGGCACTGCGCGAATACGCCGCCGAAATTCTGACCAGCATTGAACGTGCGCGACGAACTGTGGCCCATATCGGTGGTCTGCCGTCGTTGGTCTCCATCGGTCTGGCCGACGGGCTGGCGCAGCCGCGGCTATCCATGCTTTTTCAACGGTGGCGGGAAGCGGAGCCGCTGGCGAAACTGCATATCCGTGAGCTGCCAGCCTTCGAACAGCACGAAGCCTTGCAAACCGAGCGTGTCGATATCGGATTGACGTTCGGCATGAGTCAAATCAGCGGCATGGTGGTCAAGCCTCTTTGGAGCGATCCGATCGTCGTAGTGGTTCCGCGCACGCATCCTCTCGCAGATGCTGACGTACTTACGCTCCCCGAGGTGGTGGGGCATACCCTGGTGCTTTTTCATCCGCGTGCCAAGCCTGGGTTACGAGCACAGCTTGACGCACTGCTGCAAGGACTGCAGCCGAAGTTGGCAGAACCGGCGGACACGCCGGCCGGCATGATCGCTAAAGTCGGCGCCGGCTGCGGCCTGGGTTTCTTGGATGCCAACCACGGTCGCACCCTACAGCGCGACGACGTAGCGATCGTGCCCTTGGCCGAGCCCAAGGCGAACCTGACCGTCTTCGCCGTCGTCAAGGCGGGCCGCGAGGACAAGGTAAGTTCCTTTGTGACGCGGTTCATCGCCCTGGCCCAATCGTTTGCCTAG
PROTEIN sequence
Length: 294
MDVRHLRYFLALAEELHFGRAAARAHVEQSPLSRTITQLEDELGVVLLNRSRQGNTLTPAGQALREYAAEILTSIERARRTVAHIGGLPSLVSIGLADGLAQPRLSMLFQRWREAEPLAKLHIRELPAFEQHEALQTERVDIGLTFGMSQISGMVVKPLWSDPIVVVVPRTHPLADADVLTLPEVVGHTLVLFHPRAKPGLRAQLDALLQGLQPKLAEPADTPAGMIAKVGAGCGLGFLDANHGRTLQRDDVAIVPLAEPKANLTVFAVVKAGREDKVSSFVTRFIALAQSFA*