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SCNpilot_expt_1000_bf_scaffold_639_19

Organism: SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 18433..19443

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G618_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 302.0
  • Bit_score: 143
  • Evalue 5.30e-31
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain {ECO:0000313|EMBL:EAU42896.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 302.0
  • Bit_score: 143
  • Evalue 7.50e-31
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 312.0
  • Bit_score: 132
  • Evalue 2.30e-28

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Taxonomy

Fulvimarina pelagi → Fulvimarina → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCGCGGACTTAGATGAAGGTATACACATGGACTTTGATAAACTTAGGACATTCTATTATGTTGTCCGCGAAGGGAGCGTGCAAGCTGCCGAACGCACCCTACATATTTCGGCCTCTTCAATCAGCAGACAAATTCATGCCGTTGAAACCCAAGTTGGCCTATTGCTATTTGAAAGAACACGCAAAGGTTTGAGAGTCAACGCATCTGGCCAGGCTTTGTATGAAGCTGTCAGCGCCATGATGGACAAAATGGCCACGGCCAAAAACATGCTGCTTAACTTCAAAAAGAAACCCTCTGGGCCAATTGCTTGCATTAGCAATCGGTCCATCGGTGAAGGCCTGCTAATGCCTGGCCTGCTTACTCGCCTGCCTCAGCACCCCGAGCTTGAGCTTAGCTGCCTTTGGGATGATATGGCAGTTTATCGCTTTGAGAGCGACATTGAAGCACCTGCACTTTATGTCTCGGGCCTTAACCAAAATGCTGACTGCACAATGCTCCAAGAGAAAATCTCCACATATACCTTGAAGGCTATGGCGAGCCAACACTATCTTGAGAGGCAAGGCTCTCCACTCGCGGCTAAAGACTTAAGCGCACATCAGTTGATTTCATATAATCAGCATGCTTGCGCCTACTTGCCAGAACGTTTAGAGGTCAACAAATTGTTAACATGGGGAACATCCAGCCCCCGCAATCCATTCTTAAAGGTGAGCAGCCAGCAGGCCGCCGTTACGGCTGTCAAAAGTGGCATCGGAATATGCTTGCTTCCTGAATATCTCATTGACGATGACATGGTAGAGGTTTTGGAAGACGAACCCTTTGTCCCATGGCGCAAATATTACGACATTTTTGCATTTTACAAAGAGGAATACCGCGGCTTTGAGCGCATCCATGTCATCAAGCAATTGATCCGAACGATTTTTCACGAACGCCACCAGCAAAAGCGGCTGCTTGTGATTCGCAATTTCGAGCGACAGCCGCTCATATCAGGGCAAGTAAAGAACATGTAA
PROTEIN sequence
Length: 337
MIADLDEGIHMDFDKLRTFYYVVREGSVQAAERTLHISASSISRQIHAVETQVGLLLFERTRKGLRVNASGQALYEAVSAMMDKMATAKNMLLNFKKKPSGPIACISNRSIGEGLLMPGLLTRLPQHPELELSCLWDDMAVYRFESDIEAPALYVSGLNQNADCTMLQEKISTYTLKAMASQHYLERQGSPLAAKDLSAHQLISYNQHACAYLPERLEVNKLLTWGTSSPRNPFLKVSSQQAAVTAVKSGIGICLLPEYLIDDDMVEVLEDEPFVPWRKYYDIFAFYKEEYRGFERIHVIKQLIRTIFHERHQQKRLLVIRNFERQPLISGQVKNM*