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SCNpilot_expt_1000_bf_scaffold_1091_7

Organism: SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 7225..8130

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 308.0
  • Bit_score: 233
  • Evalue 4.90e-58
Tyrosine recombinase XerD id=2697450 bin=GWA1_Alphaproteobacteria_45_9 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 306.0
  • Bit_score: 232
  • Evalue 6.00e-58
xerD; site-specific tyrosine recombinase similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 308.0
  • Bit_score: 227
  • Evalue 7.90e-57

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Taxonomy

Methyloceanibacter caenitepidi → Methyloceanibacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGTTTACATACTGACCTGCAAATTTTTTTAGAAATTTTAGCTACAGAACGTGGTTTCTCGCTCCACAGCCTCACAAGTTACCAAACAGATCTTCTGGCATTTATAGCCTCATTACAATCCCCCTTAACCACACATATCAATATGCAATCTTGCAGTGAATTTTTGGATCGACTCCATGCGCGAAAGCTTTCGCCTAAAACCATCCACCGCAAAATGGCTTCATTAAATCAATTTTTAAAATATCTTCTGGAGGAGGGACACATTTCCTCAAACCCGCTTGCCACGATGGATCGCCCTAAACTTGGACTACGACTACCCCGAATATTGAGTCAAGATGAAGTCCTTGCGCTGATTGAAGCCAGCGACACACACGACCCAAACCATCCTTTTCGATCCCGTCTTATCCTCGAATTCTTTTATGCAACTGGTATGCGCGTTTCAGAGTTAATTTCCATTGAACGCCATTGCATCATGCCTGGCAAAGGGTTGACCATTCGCGGAAAGGGCAATAAGGAGCGTTTTTTGCCATTGCACCCAATTGCATGGGACGTGTTGAATGACTATACCGCCACACTCTCTCAAATAAAGCTGGGTGGGCCGCATTGGCTTTTTCCATCGCCAAAGCCTCAACAACATATAACACGCCAACGGTGCGGCCAAATCTTAAAGGAGCTAGCTCTTTTAGCGAACTTAGACCCAGAGTGCGTTCACCCACATGTGCTGCGGCATGCGTTTGCATCCCATCTTCTGGAAGGCGGCGCAGACCTCATGGGTGTCCAAAAATTATTGGGGCACGCGGATATTTCGACAACAGAAATTTATACCCACCTTAATCACGAACAATTACGTGCATCCCTTTTTAAGGCCCACCCTTTAGCTAAAACAAAGAAGAGAAAAGAATAG
PROTEIN sequence
Length: 302
MSLHTDLQIFLEILATERGFSLHSLTSYQTDLLAFIASLQSPLTTHINMQSCSEFLDRLHARKLSPKTIHRKMASLNQFLKYLLEEGHISSNPLATMDRPKLGLRLPRILSQDEVLALIEASDTHDPNHPFRSRLILEFFYATGMRVSELISIERHCIMPGKGLTIRGKGNKERFLPLHPIAWDVLNDYTATLSQIKLGGPHWLFPSPKPQQHITRQRCGQILKELALLANLDPECVHPHVLRHAFASHLLEGGADLMGVQKLLGHADISTTEIYTHLNHEQLRASLFKAHPLAKTKKRKE*