ggKbase home page

SCNpilot_expt_1000_bf_scaffold_564_27

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(23978..25738)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 577.0
  • Bit_score: 1063
  • Evalue 0.0
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 577.0
  • Bit_score: 1063
  • Evalue 0.0
  • rbh
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S645_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 577.0
  • Bit_score: 1063
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGAAAATAAAAACGAAGCTAACATTAGGTGTCGGACTCCTGTTTGCAATGATAGCATTTCTTACTGTATTAAGTGCAACCCACATAAATAAGCTATCTAATGATGCTAAGAATATACTGGCAGATAATTACAATACTGTAGATTATTGTCGCCAGATGCTCAATGCACTGAACAGTGATATTCATAACCCTGAACAACAAAAGAAATTCAGGCAAAGCCTGGAAAAACAAACGAGGACCATCACAGAAGTTGGAGAACAGGAAATTACGGACAAGATTAAACAGGATTTTGCACTCATAGTAAATTCTCCGGATGATAGTTCCTTGCTCCGGATGATACAGAAAGACATTACCGATGTAATGCTACTGAATATGCAGGCAATACAGCGAAAAAACGAGGTAGCAGAAAAAACGGCTGATAAGGCTATTTTATGGATTGCTGTTACAGGGACATTTTGTTTTATAATAGCGTTCACCCTTCTGATAAATCTGCCTTCAAACATTGCTAATCCTATCCGGGAACTAACGGAAAGCATCAAAGAGATTGCTGCAAAAAACTACTCCAGAAGAGTACATTTTGAAGAACATAATGAATACGGTGATTTAGCTAAATCATTCAATACTATGGCGAAAAAGCTGGAAGAATACAGTAATAGTAGCATTGAAAGGTTGATGATGGCAAAAACACGTATCGAAACCCTTATTAACAATATGAGTGAGCCGGTTATTGGTTTGGATGAGAAACACACTATTTTATTTATGAATGACATCGCATTAAAAATAGCAGGTTTACAGAAAGATAATGTAATTGGCGTACCCATCAAAAACATTGCAAAACATAATGACCTTATAAAAAACTTGATACAAGATTTGCCCGAAAAAGAAACAGCCGATAAAAAACAAAAATCATTCCCTATAAAAATTTATGCCGACAATAAAGAAAGTTATTTTGAAAAGGAGATTATACCTATTCTGATTACACCCACAGGTGAGAAAGAAGAAAAACATATAGGAAACGTAATTCTCTTACAAAACATCACTCCTTATAAAGAATTGGATTTTGCTAAAACAAATTTTTTAGCCACTGTTTCTCACGAACTGAAGACCCCTATTTCATCTATACAAATGAGTTTGCAATTACTTGAAAATAAGAAGGTTGGTGAATTAAATAGAGAACAGCAAAGTCTTTTACACAGCATCAACGATGATACAGGACGATTACTGAAAATTACAGGAGAATTACTGAATATGACACAAGTTGAGAGTGGCACTATTCAAATAAGTGTTGTTCCGTCTGAAGCCAAAGAAATTGTAGAATATGCTGTAAATGCCACCAAAGCAGCAGCCGAACAAAAGCAAATCAAATTTAAAATAAAAATAGCCGATAATTTGCCACAAGTGCTTGCCGATAACGAAAAAACCGCTTGGGTATTGACTAATTTGCTTTCCAATGCCATTCGTTATTCTTATGATAATTCAATTATTAGTATTGATGTTAAAGCGACAGATAATAAGGTGCGCTTCTCCGTCACAGATACAGGTCAAGGAATTTCACCACAATATATTGACAAAATATTTGACCGATATTTCCGCATACCTGGCACAAAAAAGGAGGGTACAGGATTAGGTCTAAGCATCAGCAAAGAGTTTATTCAGGCACAGGGCGGTGAAATCTCTGTAAAAAGTGATTTAGGAGCAGGGAGCACTTTTACTTTTTCATTAAACAGCCTGCAAAGCAATAATAATATCAGTTCCACATAG
PROTEIN sequence
Length: 587
MKIKTKLTLGVGLLFAMIAFLTVLSATHINKLSNDAKNILADNYNTVDYCRQMLNALNSDIHNPEQQKKFRQSLEKQTRTITEVGEQEITDKIKQDFALIVNSPDDSSLLRMIQKDITDVMLLNMQAIQRKNEVAEKTADKAILWIAVTGTFCFIIAFTLLINLPSNIANPIRELTESIKEIAAKNYSRRVHFEEHNEYGDLAKSFNTMAKKLEEYSNSSIERLMMAKTRIETLINNMSEPVIGLDEKHTILFMNDIALKIAGLQKDNVIGVPIKNIAKHNDLIKNLIQDLPEKETADKKQKSFPIKIYADNKESYFEKEIIPILITPTGEKEEKHIGNVILLQNITPYKELDFAKTNFLATVSHELKTPISSIQMSLQLLENKKVGELNREQQSLLHSINDDTGRLLKITGELLNMTQVESGTIQISVVPSEAKEIVEYAVNATKAAAEQKQIKFKIKIADNLPQVLADNEKTAWVLTNLLSNAIRYSYDNSIISIDVKATDNKVRFSVTDTGQGISPQYIDKIFDRYFRIPGTKKEGTGLGLSISKEFIQAQGGEISVKSDLGAGSTFTFSLNSLQSNNNISST*