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SCNpilot_expt_1000_bf_scaffold_1070_18

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 17517..18536

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 368.0
  • Bit_score: 279
  • Evalue 6.80e-72
Transcription termination factor Rho n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE37_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 368.0
  • Bit_score: 279
  • Evalue 4.80e-72
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 368.0
  • Bit_score: 279
  • Evalue 1.50e-72

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAATCTATCTGATTTAGAAGGGAAAAAACTTTCAGATTTACGAGAAATAGCGAAAGCGGCTGGTTTGAAAAAAGTGGAGCTCATGAAAAAAGCAGATGTGCTGGAAGCGCTAAAAGCGCTAACGTCAGCAACGGATGCTGCAGCTTCGGAAGAACAGCCGTCAGAGAAGGCAGAAGAGAAAGCTGCTGATGAAAGCGAAAAAAAATCAAAACGACCTCGTATTAAAAAAACAGCAGAACAGCCGGAGGAAAGAACACCTTCTGAAAAAGAGCAGACCCTTCCGCTTTTTCAGGAAGAGGAGCTTGCGCAGGAAACCCGGGAAGCAAAACAGCCTGAAAGAAGAAAAGAGCAAAGGCAGCCATCACCACAGGAAGCTTCAGCTGAGACACCGCGCGCTCATCAACAGAAAAAAGGAAGAAATCTTTTGAAAGATTTTCCAAGCAGAAACAACAATCCTCAAAACAGCAATCCATCCCAGCCGCAACGGCAACAATCCCCTCCAAACAATAGCAATCAACCGCAGGAACGTATTACGGAACAGACGGTAAGAGCAGAGCAGCCGGTGAAAGAAGAACCGGTAAGTAATTTCGATCTTACAGGAATCGTAACTGCAGAAGGTGTTTTGGAAGTGGTTCAGGATCAGGGGTATGGTTTTTTGAGATCATCAGATTATAACTACCTGCCTTCTCCGGATGACGTTTATGTATCCCACAGCCAGATCAAATTATTCGGACTGAAGACCGGAGATACTGTTCGCGGTACTATCCGTCCGCCGAAAGAAGGAGAGAAATTTTTCCCTTTAGTAAAAGTTGATTCCATCAACGGACGTGACCCTTCTTACATAAGAGATCGCGTTCCTTTTCAATATTTAACCCCGCTTTTCCCGAACGAAAAGTTTATTCTTACCGGGCACAGAGAAGAAAATATGTCCACGAGAATTATGGATTTGTTCGCCCCGATAGGCAAGGATAGGAAAGGGACAGCGTGGTCTGATCGTGGCACAGCCGAAAACAGGTAA
PROTEIN sequence
Length: 340
MNLSDLEGKKLSDLREIAKAAGLKKVELMKKADVLEALKALTSATDAAASEEQPSEKAEEKAADESEKKSKRPRIKKTAEQPEERTPSEKEQTLPLFQEEELAQETREAKQPERRKEQRQPSPQEASAETPRAHQQKKGRNLLKDFPSRNNNPQNSNPSQPQRQQSPPNNSNQPQERITEQTVRAEQPVKEEPVSNFDLTGIVTAEGVLEVVQDQGYGFLRSSDYNYLPSPDDVYVSHSQIKLFGLKTGDTVRGTIRPPKEGEKFFPLVKVDSINGRDPSYIRDRVPFQYLTPLFPNEKFILTGHREENMSTRIMDLFAPIGKDRKGTAWSDRGTAENR*