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SCNpilot_expt_1000_bf_scaffold_438_8

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7123..7371)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D6890 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 80.0
  • Bit_score: 151
  • Evalue 2.80e-34
RNA chaperone Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 82.0
  • Bit_score: 150
  • Evalue 2.60e-34
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 81.0
  • Bit_score: 156
  • Evalue 1.60e-35

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Taxonomy

BJP_08E140C01_10KDA_Burkholderiales_65_51 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
GTGAGCAACAAAGGCCAACTACTTCAAGATCCGTTCCTGAACGCGCTGCGGCGCGAACACGTGCCAGTTTCCATCTATCTCGTCAACGGCATCAAGCTGCAGGGGCAGATCGAGTCCTTCGATCAGTACGTGGTTTTGCTGCGCAATACCGTCACGCAGATGGTCTACAAGCACGCCATTTCGACCATCGTTCCAGGTCGTGCCGTCAACTTCGCTGCGGCGGAAACGGCCGAGCCTGGCGAGCAATAA
PROTEIN sequence
Length: 83
VSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTIVPGRAVNFAAAETAEPGEQ*