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SCNpilot_expt_1000_bf_scaffold_438_10

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(8816..9955)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamB n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2Y6_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 377.0
  • Bit_score: 482
  • Evalue 3.20e-133
outer membrane assembly lipoprotein YfgL similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 377.0
  • Bit_score: 482
  • Evalue 1.00e-133
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 377.0
  • Bit_score: 482
  • Evalue 4.50e-133

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGATGGGCGCGGCAAACCGTACGCTGCGCCTGCTGGCGACCTGTGCTGTCGTGGCATCGGCACTGGTACTGGGCGCCTGTGGTTCATCCAGGCCCAAGCCGGTCGAGCTGGGTGCGGTCGTTCCCTTGCTTCCCGTGCACCTGTCCTGGCAGACTCAGATCGGTTCGGTGGGCAGGTTGGTGCTCGCCCCTGCCGTGCACGGCGACACCGTCGTGCTCGCTTCGGAAGGAGGCACGGTCACGGCGCTGGATGCGCGCAGTGGCGCGAGCCTCTGGCGGGTGCAGCTCGCCGATGCACTGTCGGCGGGTGTCGGCAGCGACGGCCAGCGCGCCGCCGTAATTTCCCGTGGCCGCGAACTGATCGTCATGCAGGCGGGGCACGAGCTCTGGCGCAAACCTCTGCCGGCGCAGACGTTCACGGCGCCGCTGGTGGCGGGCGGGCGCGTCTTCGTGATGACGGCCGATCGCTCGGTGATGGCGTTTGACGGCAGGAGCGGCGCCAGCCTGTGGAACCAGCAGCGCCAGGGCGAAACCCTGGTGTTGCGCGAAAACGGCCTCTTGATGGCCGTTGGCGATACGCTGGTGGCCGGTATTTCCGGGCGCATGGTGGGGTTCGATCCTGATTCCGGGAGGGTGCGCTGGGAGGCGCCGCTGGCCACGCCGCGCGGCGCCAACGATGTCGAGCGTCTGGTGGAAGTGATGGGCGGCGTGAGCCGTGAAGGCAACGTGGTCTGCGCCCGGGCGTTTCAGGCGGCCGTGGGCTGTGTGGACGCCGCTCGCGGTGCCTTGCTCTGGACGCGGACCGCTCATGGTGCCCGGGGCATCGACGGTGATGCGCAGGCGCTGTATGGCGCCGAAAGCAATGGCCTCGTGCAGGCCTGGAAACGCGCCGACGGCGCGCCCCTGTGGACGTGGCAGCAATTGCGCTATCGCCATCTCACGGCACCGCTGTTGCTTGGGCGCTCGGTGGTGATCGGCGACAGCACGGGCCTCGTGCACCTGCTGTCCAAGGAAGACGGCTCGCCGCTGAACCGCTTGACGACGGACAGCTCAGGCGTGGCCACGACGCCCGTGGTGGCAGGCAAGACCTTGGTCGTGGTCACGCGCCAGGGCAGCGTCTACGGTTTTCGACCGGATTGA
PROTEIN sequence
Length: 380
MMGAANRTLRLLATCAVVASALVLGACGSSRPKPVELGAVVPLLPVHLSWQTQIGSVGRLVLAPAVHGDTVVLASEGGTVTALDARSGASLWRVQLADALSAGVGSDGQRAAVISRGRELIVMQAGHELWRKPLPAQTFTAPLVAGGRVFVMTADRSVMAFDGRSGASLWNQQRQGETLVLRENGLLMAVGDTLVAGISGRMVGFDPDSGRVRWEAPLATPRGANDVERLVEVMGGVSREGNVVCARAFQAAVGCVDAARGALLWTRTAHGARGIDGDAQALYGAESNGLVQAWKRADGAPLWTWQQLRYRHLTAPLLLGRSVVIGDSTGLVHLLSKEDGSPLNRLTTDSSGVATTPVVAGKTLVVVTRQGSVYGFRPD*