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SCNpilot_expt_1000_bf_scaffold_438_18

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(16734..17963)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 417.0
  • Bit_score: 556
  • Evalue 5.90e-156
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 417.0
  • Bit_score: 556
  • Evalue 2.60e-155
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK0_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 417.0
  • Bit_score: 556
  • Evalue 1.90e-155
  • rbh

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAATGACGAACAGAACGCAGGTCCGGTCGACAACGCTTCGGCCCATGGGCGCGCGCCTGAGGATCAGGAGCACGCGGCGCGGCGCACGCAGCTGGGCAGGCGCAGGCGGGGGCCGCGCGGCGCGCCGGGAGAAGGGCGGCCCGGGACGGTCGTTGAAGCGGGTGGCGGCGAGCCCGGATACCGGTTCGCGGATGTCGTCTCCGGACAGCTCGACCAGGACGATGAAAACCCCGAGCTCGCCGCGCCCAAGCGCGTGCTGCAGCCGCGCCCCGAATCGCCCAAGCTGCACAAGGTGCTGGCGCAGGCGGGCATGGGCTCGCGCCTGGAGATGGAGCAACTGATTTTGGAAGGGCGCATTTCGGTCAACAACGAACCGGCCCACATCGGTCAGCGGGTGCAGTTTGGCGACCAGATCAAGGTCAACGGCAGGCCGATCCGCTTTCGCATCGAGCCGCCCGCGCCGCGCGTGCTTGCCTACCACAAGCCCGCGGGAGAAGTGGTCACGATGGACGACCCGGAAAACCGCCCGACGGTGTTTCGCAAACTCCCGCGACTGCCTCAGGGCAAGTGGCAGTCGGTGGGGCGCCTCGACCTGAATACCGAGGGCTTGCTGCTCTTCACCAATTCGGGCGATCTGGCCAACCGGCTGATGCATCCTCGCTTCGGCACGGAACGCGAATATGCCGTGCGCGTGCTCGGGGCCTTGAGCAATGAGGAAAAGCAGCAACTGCTCGACGGCGTCACGCTCGACGACGGTATGGCGGCATTCGGCACCATCGAAGACGGCGGGGGGGAAGGCGCCAATTGCTGGTACCGCGTGACGATTGCCGAGGGCCGCAACCGCGAGGTGCGCCGCATGATCGAAGCCGTGGGCCATGCCGTGAGCCGCCTCATCCGCATCCGCTACGGCGCCATGGTGCTGCCGCGCGGCCTCAAGCGCGGCACCTGGATGGAGCTGGACGAACGCGACATCCGCGCGCTGACGCAGGCGGCGGGTCTGCCTGATCGGGCACCGGCCCGCGGCGAGCGCAAGGGTGGCGGTGGTGGCGGGCAGAGAAACGGCCGACGTGGTGCACAGGGGCAGCAGGGGCGCGATTCCCGTCAGGGCGGCAGTGCCCAGCCCGACCCGATGAAGACCTCGGTGGGCTACATCGGCGCCGACAGCTTCGCACGCCAGCGCCGCCAGCGGCAAAATCCCGGCCAGCGCCGGAGTGGCCGTCGGCCCTGA
PROTEIN sequence
Length: 410
MNDEQNAGPVDNASAHGRAPEDQEHAARRTQLGRRRRGPRGAPGEGRPGTVVEAGGGEPGYRFADVVSGQLDQDDENPELAAPKRVLQPRPESPKLHKVLAQAGMGSRLEMEQLILEGRISVNNEPAHIGQRVQFGDQIKVNGRPIRFRIEPPAPRVLAYHKPAGEVVTMDDPENRPTVFRKLPRLPQGKWQSVGRLDLNTEGLLLFTNSGDLANRLMHPRFGTEREYAVRVLGALSNEEKQQLLDGVTLDDGMAAFGTIEDGGGEGANCWYRVTIAEGRNREVRRMIEAVGHAVSRLIRIRYGAMVLPRGLKRGTWMELDERDIRALTQAAGLPDRAPARGERKGGGGGGQRNGRRGAQGQQGRDSRQGGSAQPDPMKTSVGYIGADSFARQRRQRQNPGQRRSGRRP*