ggKbase home page

SCNpilot_expt_1000_bf_scaffold_438_20

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(18748..19737)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 327.0
  • Bit_score: 436
  • Evalue 9.40e-120
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 327.0
  • Bit_score: 436
  • Evalue 4.20e-119
Pseudouridine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEK2_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 327.0
  • Bit_score: 436
  • Evalue 3.00e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGCCGCGCCCGCGCCGCAAGGCGAGAGTGGCGAGCCGCAGCCTGACGCGGCGGAGTGCGAGCAGCGCGACCTCACCATCTCGGTCAGCGAGCACGGGCTGCGCCTGGACAAGACGCTTGCCCTGCTGGTGCCCGAGTTCTCGCGCAGTTACCTGCAGCAGCTGCTGGAGCAGGGGGCCGTGCAGCTCGATGGCCGCGTCGGCGTCAAGCCCGCGCACAAGGTACGCGCCGGTGATCTGCTGCGGGTGCAGATGCGCCCCACCGAGCAGAGCCAGGCATTCCACCCCGAGCCGATACCTATCGATGTGGTGCATGAAGACGAGCATCTGCTGGTGATCAACAAGCCCGCCGGGCTCGTCGTGCATCCCGCGGCCGGACACTGGAGCGGTACGCTGCTCAATGGCCTGCTCGGGCGTGACGCGGGCGCGGCACAGCTGCCGCGCGCGGGCATCGTGCACCGGCTGGACAAGGACACGAGCGGTCTGATGGTGGTGGCGCGCACCCGCGCGGCCATGGATGCGCTGACGCGAGCCATTTCCGCCCACGAAGTCAGCCGGCGTTATCTGGCCCTGGCCTGGGGGCGCTGGTTGCCGGGCGCGCGGCAAAGCGTGGACGCGCCCATCGGGCGCGATCCGCGCAATCGCCTGCGCATGGCGGTGGTGGATCTGGCGCTGCGCCCGGGCAAGACCGCGCGCACCGACATGGAAGGCCTGGCGACCGACGGCCGGCTCAGCCTGGTGCGCTGCAGCCTGCACACGGGGCGCACGCACCAGATCCGCGTGCACATGGCGTCCATCGGACACCCTCTGGTGGCTGATGCGTTGTACGGTGGCGCGCCCGCGGCGGACATGCAGCGCCAGGCCCTGCATGCCTTTTCCCTGGCCCTGGCGCACCCTGTCACTGGCGTGCTCATGCGCTGGAGCGCGCCGCTGCCGCAGGATCTGCGCCATGCGCTTGACGTGCTGGGCTTGGACTACAATGAGCCGTAA
PROTEIN sequence
Length: 330
MAAPAPQGESGEPQPDAAECEQRDLTISVSEHGLRLDKTLALLVPEFSRSYLQQLLEQGAVQLDGRVGVKPAHKVRAGDLLRVQMRPTEQSQAFHPEPIPIDVVHEDEHLLVINKPAGLVVHPAAGHWSGTLLNGLLGRDAGAAQLPRAGIVHRLDKDTSGLMVVARTRAAMDALTRAISAHEVSRRYLALAWGRWLPGARQSVDAPIGRDPRNRLRMAVVDLALRPGKTARTDMEGLATDGRLSLVRCSLHTGRTHQIRVHMASIGHPLVADALYGGAPAADMQRQALHAFSLALAHPVTGVLMRWSAPLPQDLRHALDVLGLDYNEP*