ggKbase home page

SCNpilot_expt_1000_bf_scaffold_487_9

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 8978..9706

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbJ n=3 Tax=Pseudomonas aeruginosa RepID=U8EGU6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 242.0
  • Bit_score: 421
  • Evalue 4.30e-115
  • rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KGE69519.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 242.0
  • Bit_score: 421
  • Evalue 6.00e-115
P-type conjugative transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 242.0
  • Bit_score: 404
  • Evalue 2.20e-110
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAGGATTCGCTTTCTCTCCCTTGCTATCGCGGCGTTGATCGGTGTCACGTCGACTGCGCAGGCGCAGTGGGTCGTCATCGATCCGACCAACCTCGTACAGAACACGCTCACTGCGGTTCGCACGATGGAAATGATCGAGAACCAGATCAACCAGCTCCAGAACGAAGCGCAGATGCTCGTCAATCAGGGGCGCAATCTGGCGAGCCTGCCGTTCAACACGGTCAACCGGCTGCGCTCGACGCTGGCAAACACCCAGCAGCTCATTGCGCAGGCGCAGGGAGTGGCGTTCCAGGTGCAGACCATGGATCAGCAATTCGCACAGTTGTACCCGCAGCAGTACGCCGCAACCGTGAGTGGTGATCAGATGTACCAAGACGCGCACCGGCGCTGGCAGAACACGCTCACCGGCTTGCAGACCGCGATGCAGATGCAGGCGCAGGTGTCGCAGAACCTGACCGACGACGAAAGCGTGCTGACCGATCTCGTGGGCCAAAGCCAATCGGCCACCGGCGCGTTGCAAGCCCAGCAGGCGACCAATCAGCTTCTGGCCTTGCAGGCGAAGCAGTCGATCCAGGCGCAACAACTCCAGCTCACACAGGGCCGCGCGACGGCATTGGAACTGGCGCGACAGGCTGCCGCCGTCGAACGTGGCCGCGAGGTGACGCAGCGTTTCCTGGGCACCGGCACGCCGTACACGCCGCAGTCGGTCAACTTCTACGGCAACTGA
PROTEIN sequence
Length: 243
MRIRFLSLAIAALIGVTSTAQAQWVVIDPTNLVQNTLTAVRTMEMIENQINQLQNEAQMLVNQGRNLASLPFNTVNRLRSTLANTQQLIAQAQGVAFQVQTMDQQFAQLYPQQYAATVSGDQMYQDAHRRWQNTLTGLQTAMQMQAQVSQNLTDDESVLTDLVGQSQSATGALQAQQATNQLLALQAKQSIQAQQLQLTQGRATALELARQAAAVERGREVTQRFLGTGTPYTPQSVNFYGN*