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SCNpilot_expt_1000_bf_scaffold_1051_20

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(17300..19201)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003698377 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 630.0
  • Bit_score: 1101
  • Evalue 0.0
  • rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 630.0
  • Bit_score: 1101
  • Evalue 0.0
protein-export membrane protein secd; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 630.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1902
ATGAACCGTTATCCGGCTTGGAAGTACGTGATCATCGTGGTCGCGCTGCTCGTTGCGGCGTTGTACACGTTGCCCAATTTTTATGGCGAAGCGCCTGCGGTGCAGGTTTCTTCCGGCAAGGCGACGATCAAGGTCGACACGGCCGTGCTCGAACGCGTGCAGCAGGTGGTCAAGGCGGCGGGGCTGACGTCGGACTCGGTAGTGCTCGAAGGCACCTCGGTGCGGGCGCGTTTCGACACGCCCGACGACCAGCTCAAGGCCAAGGATGCGATCGAGAAGGCGCTGATTCCCGATCCATCCGATCCGCCCTATATCGTGGCGCTCAACCTGGTCTCGCGCTCGCCCGACTGGTTGACGGCCATCAACGCGCGGCCGATGTACCTGGGTCTGGACTTGCGCGGCGGCGTGCATTTCATGCTGCAGGTGGACATGCAGGCCGCGCTCACCAAGAAGGCCGAGTCCTACGCGGGAGACTTGCGCACCTCGCTGCGCGAGAAGAACCTGCGCCACGGCGGCATCACGCGCGAGGGCCAGACGATACGTATCCGCCTGCGCGATGAAGCGACCGTGACGGCCGCGCGCAACCTGATTGCCGACCAGTTCCCCGATCTGCAGGTCACCAGCAGCCCCGATGGCGATGGTCAGCTGCTGACCGCGATGATCAAGCCGGAATCGCTGCGCAAGGTGCAGGAGCAGGCGCTCAAGCAGAATATCGTCACCCTGCACAACCGCATCAACGAGCTGGGCGTGGCCGAGCCGGTGATCCAGCAGCAGGGGCTGGACCGCATCGTGGTGCAGCTGCCCGGCGTGCAGGACACGGCCAAGGCCAAGGAAATCCTCGGGCGCACGGCGACGCTGGAAATCCGCATGGTCGATGAAAGCACCGAGGGGCGCGCCGCCGAACTCGGCAGCGGCCCGGTGCCGTTCGGCGACGAGAAATACCTGGACCGCAACCAGCAGCCCGTGGTGGTCAAGAAACAGGTGATTCTGACGGGCGAGAACCTGACCGATGCGCAGCCCGGTTTCGACAACCAGACGCAGGAGCCCACGGTCAACCTGACGCTCGATGCCAAGGGATCGCGCATCTTCAAGGACGTCACGCGTGACAACGTCGGCAAGCGCATGGCCATCATCCTGTTTGAAAAGGGCAAGGGCGAGGTTGTGACGGCGCCGGTGATCCGCACCGAAATCGGCGGCGGGCGCGTGCAGATCTCGGGCCGCATGACGACGATGGAGGCCAACGACACCGCGCTGCTGCTGCGCGCCGGCTCGCTGGCCGCGCCGATGGAGATCATCGAGGAATACACCATAGGCCCGAGCCTGGGCGCCGACAACATCCAGCGCGGCATTCACTCCGTGGTCTGGGGCATGGCGGTGATTGCGATCTTCATGTGCGTGTATTATCTGCTGTTCGGTCTCTTTTCCACGCTGGCGCTGTCGGTGAACGTGCTGCTCCTCATCGCCATTCTGTCCATGCTGCAGGCCACGCTCACCCTGCCGGGCATTGCCGCCATGGCGCTGGCCCTGGGTGTTGCCATCGACTCGAACGTGCTCATCAACGAGCGTATTCGCGAGGAGTTGCGCGCGGGTGTCTCTCCGCAGACGGCCATTCATGCCGGTTATGAAAATGCGTGGGCCACGATCCTGGACTCCAACGTCACCACCTTGATCGCGGGTCTGGCGCTGCTGGCGTTCGGTTCCGGCCCGGTGCGCGGTTTCGCCGTGGTGCACTGCATCGGCATCCTGACGAGCATGTTTTCGGCCGTGTTCTTCTCGCGCGGGATCGTCAATCTCTGGTATGGGCGACGCAAGAAGCTCAAGAGCATCTCGATCGGCCAGATCTGGAAGCCGGAAGATGGCTCGGAACTGCGTTCCGTGGCCGGCCGCGGCTACAACAATTGA
PROTEIN sequence
Length: 634
MNRYPAWKYVIIVVALLVAALYTLPNFYGEAPAVQVSSGKATIKVDTAVLERVQQVVKAAGLTSDSVVLEGTSVRARFDTPDDQLKAKDAIEKALIPDPSDPPYIVALNLVSRSPDWLTAINARPMYLGLDLRGGVHFMLQVDMQAALTKKAESYAGDLRTSLREKNLRHGGITREGQTIRIRLRDEATVTAARNLIADQFPDLQVTSSPDGDGQLLTAMIKPESLRKVQEQALKQNIVTLHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKEILGRTATLEIRMVDESTEGRAAELGSGPVPFGDEKYLDRNQQPVVVKKQVILTGENLTDAQPGFDNQTQEPTVNLTLDAKGSRIFKDVTRDNVGKRMAIILFEKGKGEVVTAPVIRTEIGGGRVQISGRMTTMEANDTALLLRAGSLAAPMEIIEEYTIGPSLGADNIQRGIHSVVWGMAVIAIFMCVYYLLFGLFSTLALSVNVLLLIAILSMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRAGVSPQTAIHAGYENAWATILDSNVTTLIAGLALLAFGSGPVRGFAVVHCIGILTSMFSAVFFSRGIVNLWYGRRKKLKSISIGQIWKPEDGSELRSVAGRGYNN*