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SCNpilot_expt_1000_bf_scaffold_1274_11

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(12751..16293)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 999.99
  • Bit_score: 1894
  • Evalue 0.0
DNA polymerase iii, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 999.99
  • Bit_score: 1894
  • Evalue 0.0
  • rbh
DNA polymerase III, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ8_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 999.99
  • Bit_score: 1894
  • Evalue 0.0
  • rbh

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3543
ATGTTTGTCCACCTGCGCCTGCATTCCGAATTTTCCGTGGTCGACGGCACCACGCGCATCGATGAAGCGGTGGACGCCGCCGCCAGGGATGGCCAGGGAGCCTTGGCGCTCACCGACCTGAACAACCTGTTCGGCGCGCTCAAGCTCTACAAGGCCGCGCGTGGCAAAGGGGTCAAACCCGTCATCGGCGCCGAGATCTGCCTGGAAGATGTCGCGGGGGGCGAGCCCACGCGCATCGTGCTGCTGGTGCAGAACCGGCAGGGCTACTTCAACCTGTGCGAGTTGCTCACCCGCGCCTGGATGCAGGGGGTGGTGCGCGAGCTGGCGGTGTGCCGCTGGACGTGGCTGCGGGAACTGGCCGAGGGCTTGATCGCGCTCTCGGGCGCGCAGGCCGGCCCGGTGGGACGTGCGCTGGTGCAGGGCAACGACGCGGGCGCCGCCGAGCAGGCACTGCAGCTCGCGGCCGTTTTTCCTCATCGTTTCTATCTGGAACTGCAGCGCGCGGGACGCGACGATGACGAGGCCCATGTGGTGGCCACCGTGCAGCTGGCGGCACGCCTGCAGCTGCCCGTCGTGGCCACGCAGCCGGTGCAGTTTCTGCAGGCCGATGACTACGAGGCGCACGAGGCGCGCATCTGCATCGCCGAGGGCAGCACCCTGGGCGACCGGCGGCGCGTGCGGCGCTTCACGCGCGAGCAGTATTTCAAGAGCAGCGCGCAGATGCAGCAGCTCTTTGCCGATGTACCCTCGGCGCTGGCCAACACGGTGGAGATCGCGCGCCGCTGCAGCCTCTCGCTGGTGCTGGGCAAGCCGCAGCTGCCCGACTTCCCGATCCCGGCGGGCATGGTGATGGAGGACTATTTCCGCCATGTCTCGCAGGAGGGGCTGCAGGAGCGCCTGCGCCATCTCTACCCCGATGCGACGCAGCGCGAGCGCGAGCGGCCGCGCTACGAGGAACGGCTGGCGTTCGAGCTGGGGATCATCATCGAGATGGGCTTTCCCGGCTATTTCCTGATCGTCGGCGACTTCATCCAGTGGGCCAAGAACAATGCCTGTCCGGTGGGCCCGGGGCGCGGCTCGGGCGCGGGCTCGCTCGTGGCCTACGCGCTCAAGATCACCGACCTCGATCCGCTGCACTACAACCTGCTGTTCGAGCGCTTCCTGAACCCCGAGCGCGTGTCCATGCCCGACTTCGACGTGGACTTCTGCCAGGCCAACCGCGACCGGGTGATCGACTACGTGAAGGAGCGCTACGGCAAGGATGCCGTGAGCCAGATTGCCACCTTCGGCACCATGGCCGCCAAGGCCGCGATCCGCGATGCCGGGCGCGTCATGGACATGAGCTACACCTTCTGCGACGGCATCTCCAAGCTCGTGCCGGCCAAGCCGGGGCAGACCTACACGCTCGCCTATCCGCCAGAGCCGCGCATCGAAGGGGACAAGCACAACTACGCGCTGGAGCTGGAGCCGCAGCTCATGGCCCGCGTCAAGGGCGAGGAAGAGGTGCGCATGGTCGTCGAGATGGCGCAGAAGCTCGAAGGCCTGACGCGCAACATCGGCATGCACGCGGGCGGCGTGCTGATCGCCCCGGGCAAGCTCACCGACTTCTGCCCGCTGTACCAGCAGCCGGGCAGCACCTCGGCCGTGAGCCAGTTCGACAAGGACGACGTAGAGGCGATCGGCCTGGTGAAGTTCGACTTTCTGGGCCTGGCGACGCTCACCATCCTGGAGCTGGCGCGTGAGTTCATCATGGCGCGGCACAAGGGGCAGGAGAACTTTGCCTTCGAGAACATTCCGCTGGACGACGCACCCACCTACCGGCTGTTCCAGGAAGGGCGCACCGAGGCGGTGTTCCAGTTCGAAAGCCGCGGCATGCAGGGCATGCTCAAGGAAGCGCGTCCCGGCCGCCTCGAAGACCTGATTGCCCTGAATGCCCTGTACCGTCCGGGTCCGATGGACCTGATCCCGAGTTACATCAACCGCAAGCACGGCAAGGAAGAGGTGATCTACCCGCACCCGCTGGTCGAGCCGGTGCTGGCCGAGACCTACGGCATCATGGTCTACCAGGAGCAGGTGATGCAGACCGCGCAGGTGCTGGGCGGCTACACGCTCGGCGGCGCCGACCTGCTGCGCCGCGCGATGGGCAAGAAAAAGCACGAGGAAATGGCCAGGCACCGCGAAATTTTTCGCAAGGGTGCAGCAGAAAAAGGCATAGGGCAGGCGACGGCGGACGAGGTCTTCGACCTCATGGAGAAATTCGCGGGCTACGGCTTCAACAAGTCGCACGCGGCCGCCTACTCGCTGCTGGCGTATCACACCGGCTGGCTCAAGGTGCACTACACGGCGGAGTTCTTCTGCGCCAACATGACCATAGAGATGGACGACACCGACAAGCTCAAGGTGCTGGTCGATGACGCCATCCGCGAGGGCCTGTCGTTCGAGCCGCCCGACATCAACCGCGGCGTGCACCGCTTCGAGCCCGTGACGGACAAGGTGATCCGCTATGGCCTGGGCGCGGTCAAGGGTACGGGCCAGCAGGCGATCGAGGCCATCGTCGCGGCGCGCGAAGGCCGGGGAGAGGGGCCGCAGGGCAGCACGCGCGGGCCGTTTGCGAGCCTTTTTGACTTCTGTGCACGGGTGGATCGCACGCGCATCAACAAGCGCACGGTGGAGGCGCTCGTCAAGGCCGGGGCGTTCGACGTCATCGACCGCAACCGCGCGGCGCTGGCCGCGTCGATCGACATCGCGTTCGAGTATGCGCAGGCCCGGCTGGCCAATGCCAACCAGGGCGGGCTCTTCGACATGATGGGTGACGGCGCGGTGGGCGCGAGCGACGAGGAGCCGCCGCTCGCGAGCGTGCTGCCCTGGGATGTGCGCGAGCGCCTGACGCAGGAGAAGACGGCCATCGGCTTTCACCTCTCGGGGCATCTGTTCGATGCGGTCGAGAGCGAGGTCAGGCGCTTTGCCCCGACGCCCCTGGCCCAGCTCGCCGACAGCCGCGAGAGCATCGTGGTCGCGGGCATCGTGGCCGATCTGCGCGCGATCAATGGCCAGCGCGGCAAGCTCACGCTGTTCAAGCTCGACGACAAGAGCGCGGCCATCGACGTCTCCGCCGATGAAGGCGTGGCGGCTGCGGCCGCCGAGGCCTTGCGCGACGATGAAGCGGTCGTGATCAGCGGGCGCGTGCAGCCGGACCATTTCAATGGCGGTCTGCGCCTGAAGGCACAGCAGGTCTGGAGCGTGCCGATGGCGCGCGCGCGCTTTGGCAAGTACCTGCGGGTGCAGGCGGGCGCGAGCGTGCCCGACGTGGCCGCCTTCGTGCGGCGCTTTCCGCCGAAAGTCGAGGAAACCGGGGAAGGCCATGCCCTGGCGCGCGGCCTGTGCGTGCGCCTGGGGCTGCTGTGCGAGGCGGATGGCCAGGTGGCCAGCGCCGAATTGCAACTGGGGGACGCCAGCCGCTTTTTCCCCTCGGATGCCGCGCTGGCCGCCTGGGGTGCGCAGGCCGGTGCCGACGCGGTCCACGTGGTGTATTCCGTGTCTTGA
PROTEIN sequence
Length: 1181
MFVHLRLHSEFSVVDGTTRIDEAVDAAARDGQGALALTDLNNLFGALKLYKAARGKGVKPVIGAEICLEDVAGGEPTRIVLLVQNRQGYFNLCELLTRAWMQGVVRELAVCRWTWLRELAEGLIALSGAQAGPVGRALVQGNDAGAAEQALQLAAVFPHRFYLELQRAGRDDDEAHVVATVQLAARLQLPVVATQPVQFLQADDYEAHEARICIAEGSTLGDRRRVRRFTREQYFKSSAQMQQLFADVPSALANTVEIARRCSLSLVLGKPQLPDFPIPAGMVMEDYFRHVSQEGLQERLRHLYPDATQRERERPRYEERLAFELGIIIEMGFPGYFLIVGDFIQWAKNNACPVGPGRGSGAGSLVAYALKITDLDPLHYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKERYGKDAVSQIATFGTMAAKAAIRDAGRVMDMSYTFCDGISKLVPAKPGQTYTLAYPPEPRIEGDKHNYALELEPQLMARVKGEEEVRMVVEMAQKLEGLTRNIGMHAGGVLIAPGKLTDFCPLYQQPGSTSAVSQFDKDDVEAIGLVKFDFLGLATLTILELAREFIMARHKGQENFAFENIPLDDAPTYRLFQEGRTEAVFQFESRGMQGMLKEARPGRLEDLIALNALYRPGPMDLIPSYINRKHGKEEVIYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYTLGGADLLRRAMGKKKHEEMARHREIFRKGAAEKGIGQATADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHYTAEFFCANMTIEMDDTDKLKVLVDDAIREGLSFEPPDINRGVHRFEPVTDKVIRYGLGAVKGTGQQAIEAIVAAREGRGEGPQGSTRGPFASLFDFCARVDRTRINKRTVEALVKAGAFDVIDRNRAALAASIDIAFEYAQARLANANQGGLFDMMGDGAVGASDEEPPLASVLPWDVRERLTQEKTAIGFHLSGHLFDAVESEVRRFAPTPLAQLADSRESIVVAGIVADLRAINGQRGKLTLFKLDDKSAAIDVSADEGVAAAAAEALRDDEAVVISGRVQPDHFNGGLRLKAQQVWSVPMARARFGKYLRVQAGASVPDVAAFVRRFPPKVEETGEGHALARGLCVRLGLLCEADGQVASAELQLGDASRFFPSDAALAAWGAQAGADAVHVVYSVS*