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SCNpilot_expt_1000_bf_scaffold_645_22

Organism: SCNPILOT_EXPT_750_P_Candidatus_Accumulibacter_65_27

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(27741..28349)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318B474 similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 200.0
  • Bit_score: 193
  • Evalue 2.70e-46
Type IV fimbrial biogenesis protein PilX {ECO:0000313|EMBL:AIY43267.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 195.0
  • Bit_score: 168
  • Evalue 1.00e-38
type IV pilus assembly protein PilX similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 205.0
  • Bit_score: 126
  • Evalue 9.80e-27

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCTCGTAGCACAAAAAAAACAATCTGGGCTAGCGCTGGTCATTGCGCTCATCATGCTCGTTGTCATGACGCTCGGTGCTATCGCAATGGTGCGCTCGATGGACACGACAACCCTGATTGCAGGCAACCTCGCCTTCCGACAGAGCGCCACTTATGCTGGTGACGTCGGGGTGGAAAACGCAATAGCTTGGCTGAACGGCTCCAGCAAGGAAACTCTGACTTGCGGAGCAATCGGCAACGATCTCGCCGTCTGCCCGGCCGGCTACAAATCAAATGGCGGCAATACGACAGATACCCCTTCCGCCGGACAAACCTGGGATGCATTCTGGATGGAAAATCTTGACGCCAGTGCCGTCAAACTACCGGAGGATGCCAGCAAAAACACTGTGTCCTGGTTTATTCACCGCCTTTGCGCAGGAGCAGGCGCACTAACCGCGTCCGGTTCCAATTGCGTCGAAACACCGTCGATTGCCAGCGCCAGCGGCAATTCCAAGCGCTCCGGCACCACCAAGTTTCAAGCCTCGTCACAGGTTTACTACCGAATCACAGTTCGAGTCGCCGGCAAAAAAAATACGGTCAGCTATGTTCAGGCGATTGTCGCCCTTTAG
PROTEIN sequence
Length: 203
MLVAQKKQSGLALVIALIMLVVMTLGAIAMVRSMDTTTLIAGNLAFRQSATYAGDVGVENAIAWLNGSSKETLTCGAIGNDLAVCPAGYKSNGGNTTDTPSAGQTWDAFWMENLDASAVKLPEDASKNTVSWFIHRLCAGAGALTASGSNCVETPSIASASGNSKRSGTTKFQASSQVYYRITVRVAGKKNTVSYVQAIVAL*