ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6535_5

Organism: SCNPILOT_EXPT_750_P_Candidatus_Accumulibacter_65_27

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 13 / 38
Location: comp(4423..5502)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraG n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B2FA98 similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 234.0
  • Bit_score: 187
  • Evalue 2.60e-44
TRAG family protein {ECO:0000313|EMBL:CCD29346.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 222.0
  • Bit_score: 184
  • Evalue 3.10e-43
TRAG family protein; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 252.0
  • Bit_score: 177
  • Evalue 6.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Glomeribacter gigasporarum → Candidatus Glomeribacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGACGCACCACAAACCTGTCTCGCTTTACTACGTTGTGGGACCGGCCGACATGGTCCGTCTCATACCTCTCACGCGGCTATTCTACGATCTGTTTATCCGCCGGAATGCTGCGGATATGGAGTTCGCCGACGGACGCAGTAAGGAAAGTTATTCCTTCGAACTGCTGATGATCATCGACGAAATGACGTCGCTGAAGAAGCTTCCGGTAATCCAGGAAGCGTTGGGGTATGTGGCGGGATACGGCATCCGTATTTTTATGCTCGTGCAAGACATCGCGCAGGTCGAGGACCTCTACGGCGACAAACAGACCGTCGAATCCGGCTCTGAAACTCGCGTCGTTTATGCCCCCAACCGGACGGAGACGGCCCAAAAAATTTCAAGCATGGCAGGGAAAACCACTGTCACGGAGGCGAAAGCGACCCAAAGCGTGGACGGCATGAAGCTGGTTCCTGGGAACACATCGCTCAATACTGAAAAAATCCAGCGTGATCTGATTACTGCAGAAGAAGTGTCGAGCCTCCATGACCAGGATGTGTTGATCTTCGTAAAAGGCCAGCCGCCCATTTACGGACGAAAGGCCTTCTACGATGAAGATCCTGTACTCTTGGGCCGCGCAAAGATGCCCGCACCCAAGCGGTCCGCGGTCCTGCGGACGCCGGAGAAACGTCCCCACATAACATCGGCCAGCGAAACAAGACAAGCCGTGCCAGACGAACCACCCACACGGGAGCAAATTGTGGAAGACATGTCGGAAAAATGGGAAGCTTCTCGCCGGGCCATGGCGGAACAGATTTCCCGGAAACTTGGCGCGTCCGGAGACAACTCCAGTGCTCGGCACGATCGTTCGAGTGTCGATGGCAAAGGGATTGTGGCAGCCAAACAGCCCGTCGGAGGGGAAGGGGAGGGCGGATCATCGGACCGCCTCGATGGACCAAGCGACAACCGCCCCCGTCCAAAACCGCGTAGTCGTTATGCTAACCGGGATTTGGTGCTCACTGCTGCAGACCGAGAACGCATAAACAGCTTGGTGGCCGATGTGGCGCTCACGGAGCAAGTAGCAAAAATTTCGGCATTCTGA
PROTEIN sequence
Length: 360
MTHHKPVSLYYVVGPADMVRLIPLTRLFYDLFIRRNAADMEFADGRSKESYSFELLMIIDEMTSLKKLPVIQEALGYVAGYGIRIFMLVQDIAQVEDLYGDKQTVESGSETRVVYAPNRTETAQKISSMAGKTTVTEAKATQSVDGMKLVPGNTSLNTEKIQRDLITAEEVSSLHDQDVLIFVKGQPPIYGRKAFYDEDPVLLGRAKMPAPKRSAVLRTPEKRPHITSASETRQAVPDEPPTREQIVEDMSEKWEASRRAMAEQISRKLGASGDNSSARHDRSSVDGKGIVAAKQPVGGEGEGGSSDRLDGPSDNRPRPKPRSRYANRDLVLTAADRERINSLVADVALTEQVAKISAF*