ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1294_6

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 6966..7286

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645F72 similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 106.0
  • Bit_score: 200
  • Evalue 8.90e-49
cytochrome c transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 177
  • Evalue 2.00e-42
Probable cytochrome C transmembrane protein {ECO:0000313|EMBL:AAZ98679.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 177
  • Evalue 8.70e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGATGAAGAAATTGATGATGACTGCAGCATCCGCTGCCCTGCTGGCCATGTCCGGCGTCGCTTCTGCCGATTCCGAACAGGCGCTGGCCCAGAAAAACGCGTGCATGTCCTGCCACGGCGTGGATAAGAAAATTGTCGGCCCTGCTTTCAAGGACGTGGCCAAAAAATATGCCGGCGACAAGACCGCGAAAGACAAGCTGGTCGCCAAGGTGAAAGCCGGCGGCAAAGGGGTGTGGGGGCCGATTCCCATGCCGCCGAACGCACAGGTCAAGCATGAAGACGTGGAGAAGATCGTCGAATGGGTGTTGAGCCTGAAGTGA
PROTEIN sequence
Length: 107
MMKKLMMTAASAALLAMSGVASADSEQALAQKNACMSCHGVDKKIVGPAFKDVAKKYAGDKTAKDKLVAKVKAGGKGVWGPIPMPPNAQVKHEDVEKIVEWVLSLK*