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SCNpilot_expt_1000_bf_scaffold_1294_13

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 13447..14265

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel family protein; K03442 small conductance mechanosensitive channel id=12496189 bin=THIO_MID species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 273.0
  • Bit_score: 485
  • Evalue 4.60e-134
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 268.0
  • Bit_score: 432
  • Evalue 1.10e-118
  • rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABK99231.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 268.0
  • Bit_score: 432
  • Evalue 5.00e-118

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Taxonomy

Pelobacter propionicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGACAAGGACATCCAGCGCTATACCGAAATCGCCGCCGCTTACGCCACCGAGGCCGGAATGAAAATCCTCGCCGCGATCGCCTTCTGGATCATCGGCCGCTGGCTGATCGGCCTGGTCGGGCGCATGCTGCAGGGCGCGCTGCACCGGCAGAAGGTCGACCCCACGCTGATGCGCTACATCGGCAGCTTCGTCGCGGTCACCCTCAACATCGTGCTGGTGGTCGCCATTCTCGGCTACTTCGGGGTGCAGACGACGACCTTCGCCGCCCTGGTCGCCGGCATCGGCATCGCCATCGGCGCCGCCTGGGGCGGGCTGCTGTCCAACCTGGCGGCGGGCGCCTTCCTCATCGTGCTGAAGCCGTTCAAGGTGGGCGACTTCATCACCGCCGGCGGCGTCACCGGCACGGTCAGGGAAATCGGCCTGTTCGCCACCGGCCTCGACACCCCGGACAACGTGTTCACCATCGTCGGCAACGGCAAGATCTTCGGCGACACCATCCAGAATTTCAGCACCAACGCCTTCCGCCGCGTTGAGCTGAAATGCCAGCTCGCAGGCAGCGCCGACCACGTCGCCGCCATGCAGCTGCTGCGCGACAAGCTGCAGGCGATTCCCAACGTGCTGGCCGAGCCGGCGGTGGAGGTCGAAATCCTCGAATTCAACCTGGTCGGCCCGGTGCTGGCGGTACGCCCGTTCTGCCATACCGACCATTACTGGCAGGTGTATTTCGACGGCAACCGCGTCATCCGCGAAGCGCTCGCCGAGGCCGGCTTCCCGGCGCCGATGCCGGCCCAGCTGATGCTCACCCGCGCGGCTTGA
PROTEIN sequence
Length: 273
MDKDIQRYTEIAAAYATEAGMKILAAIAFWIIGRWLIGLVGRMLQGALHRQKVDPTLMRYIGSFVAVTLNIVLVVAILGYFGVQTTTFAALVAGIGIAIGAAWGGLLSNLAAGAFLIVLKPFKVGDFITAGGVTGTVREIGLFATGLDTPDNVFTIVGNGKIFGDTIQNFSTNAFRRVELKCQLAGSADHVAAMQLLRDKLQAIPNVLAEPAVEVEILEFNLVGPVLAVRPFCHTDHYWQVYFDGNRVIREALAEAGFPAPMPAQLMLTRAA*