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SCNpilot_expt_1000_bf_scaffold_1129_16

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(13677..14864)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z35_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 384.0
  • Bit_score: 368
  • Evalue 1.20e-98
  • rbh
lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 384.0
  • Bit_score: 368
  • Evalue 3.80e-99
  • rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 380.0
  • Bit_score: 393
  • Evalue 4.90e-106

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGAACGAAAACAACACGCCCGTCCTGGCAGATGACGACGATGGAATCAGCTTGCTAGACATCCTGCAGACCCTGGCCGAAAACGCCCGATTGCTGATTTTTGGCCCGATTGTCGCCGGGCTGATCGCCTTGGGCGTGGCCTCATCAACCAAGCCCTTCTACGTCGCCGAAACCAACATCATGACGCCGCAACAGCAGGGCGGCGCCGCCGCCGCGCTGGCACAGCTCGGTGCATTGGCGGGTGTGGCAGGCGCGGCCACCGGCCTCAAAACCCCGGCCGACATGTATGTCGGGCTGCTGCGGAGCAGAACGGTTGCCGACCGCATGGTCGACCGCTTCGGCATGATGCAGATTCCTGGCGTGAAGGCCCGTGAGGACGCCCGCGACATCTTGACCCGGATGACCGGGGGGGAAGTTCGCAAGGATGGCCAGATCACCATCAAGGTTGCCGCGGGCACCCCCCAGCTGGCCGCCGCGATGGCGAACGCCTATGTCGAAGAGCTCTCCTCGCTGACCGGCCGCCTGGCGGTGACCGAAGCGCAGAAGCGCCGGCAGTTTCTTGAAAAAGAGCTGGCCAAGGCCAAAGAGAATCTGGTCAAGGCGGAAATCGCCCTGGGCGGCGCCGGCGTCAGCGAAGACACGCTGAAGTTCAACCCTGCAGTCATGGGTCAAGGCCTCGCCACCCTCAAGGCGCAAATCATGGCCAAGGAACTGCAGCTATCCAGCATGCGCGGCATCCTCACCGAGAACAGCCCGAATTTTCGCCAGGCCCAGCAAGAACTGGCTGCGCTGCGCGCGCAACTGGGCAAGTTCCAAAATACCCGCCCCAACGGAGATAATGCCGAATACATCAGCCGCTACCGCGACTTCAAATACAACGAAGTGCTGTTCGAACAGCTTTCCAAGCAATACGAACTGGCCAAAATTGACGAGTCCAGCGATGGCGCAGTAATCCAGGTTGTGGATGTGGCGGTGCCGCCAGAGCGCAAGTCCAATACCCCAAAATCGAAGATTGCCGCTCTGGCTGCGCTGGCCGCCGGCTTCGTGTTGCTGGTATTCGTGTTTGTTCGTCGTGCCCTGAAAAATGCCAACCAGAACCCCGAAAATACGGCCAAGTTCGCGGCCATCCGTGCCGGCTTTTTGCGGGTGCTGATGCCTTGGCGGCGGCCTGTAAAGGTGGGCCGCTGA
PROTEIN sequence
Length: 396
MNENNTPVLADDDDGISLLDILQTLAENARLLIFGPIVAGLIALGVASSTKPFYVAETNIMTPQQQGGAAAALAQLGALAGVAGAATGLKTPADMYVGLLRSRTVADRMVDRFGMMQIPGVKAREDARDILTRMTGGEVRKDGQITIKVAAGTPQLAAAMANAYVEELSSLTGRLAVTEAQKRRQFLEKELAKAKENLVKAEIALGGAGVSEDTLKFNPAVMGQGLATLKAQIMAKELQLSSMRGILTENSPNFRQAQQELAALRAQLGKFQNTRPNGDNAEYISRYRDFKYNEVLFEQLSKQYELAKIDESSDGAVIQVVDVAVPPERKSNTPKSKIAALAALAAGFVLLVFVFVRRALKNANQNPENTAKFAAIRAGFLRVLMPWRRPVKVGR*