ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1207_11

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(11239..12429)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F3972 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 388.0
  • Bit_score: 665
  • Evalue 3.60e-188
  • rbh
secretion protein HlyD; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 396.0
  • Bit_score: 587
  • Evalue 2.30e-165
  • rbh
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97534.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 396.0
  • Bit_score: 587
  • Evalue 1.00e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGCGGCTGCGCGCAAAAATCGGAATGCTGGCAACCGCTGCCGTGGTGGCGGCGGGGCTGGCCTACGGCTTCATGCCGCGCGCCGTGCCGGTCGACGTCGCCGAAGTGAAGCGCGCGCCGCTCGCGGTGACGGTGGAGGAGGAGGGCAAGACGCGGGTGCGCGAGCGCTACACCGTGTCGGCGCCGGTGGCGGGCTACGTCCGCCGCATCGGCCTCGACGCGGGCGATGCCGTCAAGGCGGGACAAATGCTGGCGGTGATCGAGCCGGCGCGCGCGGTGGCGCTCGATCCGCGCACGCGCGCGCAGGCGCAGGCGCAGGCGAGCGCCGCCCGCGCAGCGCTCGCCGTCGCCGAGGAGAATGCGCGCGCCGCCGCAGCCGCCGCGCAGCTGGCACGGCAGGAGCGCGTCCGCGCCGAGTCGCTGCGGCAGTCGAATTTCGTCTCGGCTCAGGCACTCGATGTCGCGATCACCGCCGAGGCCCGCGCCCGTGCCGCCGACCAGGGCGCGCAGCATGCGGTGCGGGTGGCGCGCTTCGATCTGGAGACGGCGCTGGCGGCGGTCGCCGGCACCGGCCGCCTGAAGAACGGGGGGGCCGACGTGGTGCAGGTACGCGCGCCGGCCGACGCTCACGTCTTGCGCCTGCTGCAGAAAAGCGAGGGCGCAGTGGCGGCCGGCCAGCCGCTGCTCGAGATCGGCGACCCCGCCAGCCTGGAAGTCGAGGTCGAGGTGCTGTCCACTCACGCGGTGAAGATCGCGCCCGGCTCGAAAGTCATCCTCGACCGTTGGGGCGGCGAGCGGCCGCTCGAAGGCCGTGTGCGGGTGGTGGAGCCGAGCGGTTTCACCAAGATTTCCGCGCTCGGCGTCGAGGAGCAGCGGGTACGCGTCATCGTCGATTTCAGTTCGCCGCGCGAGGCGTGGGCGCGGCTCGGCGACGGCTACCGGGTGGAGGCGCGCTTCGTGCTGTGGGAAGGCAAGGACGTGCTGCAACTGCCGACCAGCGCGTTGTTCCGGCAGGGCGAGGGCTGGGCGGCGTTCGTGATCGATGGCCGCCGCGCGCGCCTGGTGCCGGTCGGGATCGGTCAGCGCGCCGGGCTCGCCACCGAGGTGGCGGCAGGACTCAAGGCCGGCGACCGGGTGGTGGCGCACCCCGACGAGACGATCAAGGACGGCGTGCGGGTGAGGCCGCGCTAG
PROTEIN sequence
Length: 397
MRLRAKIGMLATAAVVAAGLAYGFMPRAVPVDVAEVKRAPLAVTVEEEGKTRVRERYTVSAPVAGYVRRIGLDAGDAVKAGQMLAVIEPARAVALDPRTRAQAQAQASAARAALAVAEENARAAAAAAQLARQERVRAESLRQSNFVSAQALDVAITAEARARAADQGAQHAVRVARFDLETALAAVAGTGRLKNGGADVVQVRAPADAHVLRLLQKSEGAVAAGQPLLEIGDPASLEVEVEVLSTHAVKIAPGSKVILDRWGGERPLEGRVRVVEPSGFTKISALGVEEQRVRVIVDFSSPREAWARLGDGYRVEARFVLWEGKDVLQLPTSALFRQGEGWAAFVIDGRRARLVPVGIGQRAGLATEVAAGLKAGDRVVAHPDETIKDGVRVRPR*