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SCNpilot_expt_1000_bf_scaffold_1529_22

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(22208..23503)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M672_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 1.00e-172
  • rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 3.30e-173
  • rbh
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ACM21860.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 1.50e-172

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Taxonomy

Geobacter daltonii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAACCCCTCCGACACTCCGCAAGCCAACCCGGCCGAAGCCCTGAAAAACCTCCTCGCCGCCCGGCCTGCCGGGCGGTTCCCGCGCCGCCGGCTGTGGCTGGCCGGCGCGGCGCTGGTGCTGATCGCGGCGGCGGGCCTGCTGGCTTACGGGCCCGCCGAGCAGGCGGCCGGGCCCCGTTACAAAACCGAGCCGGCCAGCGTCGGCGTTCTGGTGGTCAAGGTTTCCGCCACCGGCAACCTGCAGCCCACCAATCAGGTGGACGTGGGCAGCGAACTGTCCGGCATCGTCGACAAGGTGCTGGTCGACGACAACGACCGGGTGAAGAAGGGACAGGTTCTGGCCCGCCTGGACCTGTCCAAGCTGAACGACGCGGTGGCGAAATCGCGCGCCAACCTGGACTCGGCGCTGGCGCAGGTGCTGCAGGCGCAGGCCACGGTGGCGGAAGCGCACGCCGCGCTGGCGCGCTTCCGGCAGGTGGCGCAGCTGTCCGGCGGCAAGGTGCCGTCCAGAAGCGAAATGGACAGCGCCGAGGCAAATCTGAAACGGGCCGAGGCCAATGAAGCCAGCGCCCGTGCGAGCGTCACCCAGGCCCGCGCCACGCTGCAGTCGGATCAGACCAACCTGGCCAAGGCCAGCATCCGTTCGCCCATCGACGGCGTGGTGCTGACCCGCAAGGTGGAGCCGGGCCAGACGGTGGCCGCCTCCTTCCAGGCCCCGGTGCTGTTCACCCTCGCCGAGGACCTCGCCAAGATGGAGCTGCAGGTGGACGTGGACGAAGCCGACGTCGGCCAGGTGAAAGTCGGCCAGAAAGCCAGCTTCAGCGTCGATGCCTGGCCTGGCCGCCGCTACGCCGCCGTCATCACCCGGGTGAGCTACGGTTCCCAGGTCAAGGACGGCGTGGTGTCCTACCTGGCCGTGCTCGAAGTGGGCAACGACGACCTCAGCCTGCGTCCCGGCATGACCGGCACCGCAGAGATCACCACCCTGACCCGGGAGCGTGCCCTGCTGGTGCCGAACGCGGCGCTGCGCTTCACTCCTGCGGCGGCCGCTGCAGTGCAGAAAAAATCCGGCAGCGCTCTGACGGGCATCCTGATGCCGCGTCCGCCCAGGCAGACGCCGAAGGCCCAGGCGGCCGATGGCGGCACGCCGCGGGTGTGGACGCTGCGCGACGGCCAGGCCGTGCCGCTGGAAGTGAAAACCGGCGCCAGCAACGGCCGGGTGACCGAGATCGTCGGCGGCGAACTGCGCGCCGGCATGGAGGTGATCACCGAGGCGGCGGACAGGCAGCCATGA
PROTEIN sequence
Length: 432
MNPSDTPQANPAEALKNLLAARPAGRFPRRRLWLAGAALVLIAAAGLLAYGPAEQAAGPRYKTEPASVGVLVVKVSATGNLQPTNQVDVGSELSGIVDKVLVDDNDRVKKGQVLARLDLSKLNDAVAKSRANLDSALAQVLQAQATVAEAHAALARFRQVAQLSGGKVPSRSEMDSAEANLKRAEANEASARASVTQARATLQSDQTNLAKASIRSPIDGVVLTRKVEPGQTVAASFQAPVLFTLAEDLAKMELQVDVDEADVGQVKVGQKASFSVDAWPGRRYAAVITRVSYGSQVKDGVVSYLAVLEVGNDDLSLRPGMTGTAEITTLTRERALLVPNAALRFTPAAAAAVQKKSGSALTGILMPRPPRQTPKAQAADGGTPRVWTLRDGQAVPLEVKTGASNGRVTEIVGGELRAGMEVITEAADRQP*