ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1529_23

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(23500..24993)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036886CF similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 497.0
  • Bit_score: 816
  • Evalue 1.60e-233
  • rbh
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 466.0
  • Bit_score: 627
  • Evalue 4.30e-177
  • rbh
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 484.0
  • Bit_score: 702
  • Evalue 3.60e-199

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGGCCCTCCCGGCACTTCGATGCGCGCCTGCCGTCCCTGACCTCCTGCCCCTGAACGCGCCGCCGGCCGCCCGCCGCCTGGTTGCCTTGATCGCGCTCGGCCTGGCCGGCTGCGCCGCGGTGGGGCCGGATTACCGGGCGCCGGCGCCGGCGGTGCCCGCGGGCTGGAGCCGGATCGATGCGCCGCTCGTCCATGCCGCGGCCCCCGGCGATCTGCGCCACTGGTGGCGGGGACTCAACGATCCGCTGCTGTCCGGGCTGGTGGAGCAGGCGCTGCTGGCCAGCCCCGATTTGCGCAGCGCGCAAGCCAGGCTGCGCGAGGCGCGCGCGCGTCGCGCGCTGGCCGCGGCGGGCCGCTTGCCGAGCGTGACCGGCTCCGGTTCTGCGCGCCGCAGCGACTCCAGTGCCGAAAGCGGCAGCGGTGCGGCGCGCAATCTGTTCAGCGCCGGCCTGGATGCGAGCTGGGAGCTGGACGTTTTCGGCGGGATCCGGCGCGGCATCGAGGCGGCCGAGGCCGATCTGCAATCGTCGCAGGCCGGCCTGCACGACACCCAGGTTTCGCTGGCGGCCGAGGTGGCCCTCAATTATGTCGAGGTGCGCGCCTTCCAGACCCGGCTTGGCATTGCCCGGGACAATCTGGCGAGCCAGTCGGAGACGCTGCAGCTCACCGACTGGCGCGCCCAGGCCGGGTTGGTCGGCAACCAGGACGTGGAGCAGGCGCGCAGCAATCAGGCGCTGACCCGGGCTCAGATTCCCAGCCTGGAAACCAGCCTGGCGGAGGCGGAACATCGCCTGGCCATTCTGCTGGGGATGGCGCCGGGCACGCTGCACGCGCGCCTCGCCGATGCCGCCGGCGTGCCTGCGATGCCGGCCCGGATTGCCGTCGGCATCCCCGCCGACACCCTGCGCCAGCGTCCCGACGTGCGGGTGGCCGAGCGCAGGCTGGCGGCGCAAACCGCCCGCGTCGGCGCGGCCGAAGCGGCGCGCTATCCGGGCTTCAGTCTCGCCGGCTCGATCGGCCTCGAAGCGCTGACCCTGGGCGCGCTCGGCAACGGCGGAGCCGGCACCGCGTCGCTGTTCGCCGGGGTGACCGCGCCGCTCTTCGACGCCGGGCGCCTGCGCACCCAGGTGGAGATCCAGGACGCGCTGCGCGAGCAGGCGCAGGTGGCCTACGAACAGACGGTGCTCAACGCGCTGGAAGAGGTGGAAAACGCGCTGGTCGCCCTCGCCCGCAACCGGGAACGCGAGCAGGCCCTGACGGAGTCCGCGGCGGCTGCGCGCAATGCGGCGCTGCTGGCGCGGCAACGCTACAGCGCCGGCCTGATCGATTTCCAGTCGGTGCTCGATACCGAACGCAGCGTGCTGTCGGTAGAGGACAGCCTGGCCAGCACCCGCGCCGACGGCGTGCTGGCGCTCATTCGTTTGTACAAGGCGCTGGGCGGCGGCTGGTCGCCGTCCGGCGCAATCCCTCCAGCCGGCAAGGATGCGCCATGA
PROTEIN sequence
Length: 498
MALPALRCAPAVPDLLPLNAPPAARRLVALIALGLAGCAAVGPDYRAPAPAVPAGWSRIDAPLVHAAAPGDLRHWWRGLNDPLLSGLVEQALLASPDLRSAQARLREARARRALAAAGRLPSVTGSGSARRSDSSAESGSGAARNLFSAGLDASWELDVFGGIRRGIEAAEADLQSSQAGLHDTQVSLAAEVALNYVEVRAFQTRLGIARDNLASQSETLQLTDWRAQAGLVGNQDVEQARSNQALTRAQIPSLETSLAEAEHRLAILLGMAPGTLHARLADAAGVPAMPARIAVGIPADTLRQRPDVRVAERRLAAQTARVGAAEAARYPGFSLAGSIGLEALTLGALGNGGAGTASLFAGVTAPLFDAGRLRTQVEIQDALREQAQVAYEQTVLNALEEVENALVALARNREREQALTESAAAARNAALLARQRYSAGLIDFQSVLDTERSVLSVEDSLASTRADGVLALIRLYKALGGGWSPSGAIPPAGKDAP*