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SCNpilot_expt_1000_bf_scaffold_3311_5

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2846..4006)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361E8C9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 388.0
  • Bit_score: 744
  • Evalue 6.00e-212
  • rbh
Hydrogenase (NiFe) small subunit HydA {ECO:0000313|EMBL:EIJ36041.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 387.0
  • Bit_score: 429
  • Evalue 4.60e-117
hydrogenase (NiFe) small subunit HydA similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 360.0
  • Bit_score: 392
  • Evalue 1.80e-106

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAACCGTACATTGCCTATCGCATCGGACCGTGGCGTCAGCCGGCGCGCCTTCCTCAAGTTCTGTGCCCTGACCGCCTCGCTGCTCGCGCTGCCGCCGGGCGCGGCGGCCATCCTGGCCGACTCGCTTGCCAGGGCCCGGCGCCTGCCGGTGGTATGGCTGTCATTCCAGGAATGCACCGGCTGCACCGAATCGCTCACCCGCTCGTCCGCCCCCTCCATCGAGCGGCTGCTGTTCGAACTGATTTCGCTGGACTACAGCCACCCCCTCCAGGCCGCCGCCGGCGCGGCCGCGGAACAGGCGCGGGAAGCAAGCCTGGCCGCAAACCACGGCCGGCTCCTGCTGGTGGTGGACGGCTCCGTGCCGACCGCGCTCGGCGGAGCCTGTTCCACCATCGCCGGCGAGGACAACCTGAGCCTGCTCGCGCGCTGCCTGGACGCCGCCGAGGCGGTGCTTGCCGTGGGCACCTGCGCCGCCTTCGGCGGGCTGCCCGCCGCCGCCCCCAATCCGACCGGGGCGATGGGCATCGCCGAGCTGATGGCGCAGGGTCTGGTGCCGCGCCGGCCGCTGGTCAACCTGCCCGGCTGCCCGCCCATTCCCGAGGCGATGAGCGCCGTGCTGGCCCACCGCGTGGCCTTCGGCCGCTTTCCCGAACTCGACGCCCAAGGCCGTCCGCTGGCGTTTTATGGCGAAACCGTGCACGACCGCTGTTCGCGGCGCGGCCACTACGAGGCCGGCCGCTTCGCCAAGACCTTCGACGACGCCGGCGCGCGCGCCGGCTGGTGCCTGCTGGAACTCGGCTGCAAGGGGCCAACAACCCGCAATGCGTGCTCCACCCTGCGCTGGAACGGAGTGAGCAACCCGGTCGAATCCGGCCACCCCTGCCTCGGCTGCAGCGAAGCGGGATTCTGGGACCGCGGCAGTTTCTACGCCCCGCTTGCGGCACCGGCGGCAGCCGCCGCCGAACCCCAGGCCCGGCGGGGCGCCGCGGTGTACGACAGGAATTGCGCCAGCTGTCACGGCAGCGCGCCGGGCGGCCTGGCGACCCCGGCTGACGAGGTGCCGGCCCTGCTGCGGTCGGGCAAGGTGCGTGCCCACCGCTTCAGCCTGAAGGACGGCGACATGCAGGCGCTGCTGGATCACCTCAAGGAAGCGCGCTGA
PROTEIN sequence
Length: 387
MNRTLPIASDRGVSRRAFLKFCALTASLLALPPGAAAILADSLARARRLPVVWLSFQECTGCTESLTRSSAPSIERLLFELISLDYSHPLQAAAGAAAEQAREASLAANHGRLLLVVDGSVPTALGGACSTIAGEDNLSLLARCLDAAEAVLAVGTCAAFGGLPAAAPNPTGAMGIAELMAQGLVPRRPLVNLPGCPPIPEAMSAVLAHRVAFGRFPELDAQGRPLAFYGETVHDRCSRRGHYEAGRFAKTFDDAGARAGWCLLELGCKGPTTRNACSTLRWNGVSNPVESGHPCLGCSEAGFWDRGSFYAPLAAPAAAAAEPQARRGAAVYDRNCASCHGSAPGGLATPADEVPALLRSGKVRAHRFSLKDGDMQALLDHLKEAR*