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SCNpilot_expt_1000_bf_scaffold_388_21

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 21254..21436

Top 3 Functional Annotations

Value Algorithm Source
Helicase subunit of the DNA excision repair complex n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B5U2_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 60.0
  • Bit_score: 108
  • Evalue 2.00e-21
Helicase subunit of the DNA excision repair complex {ECO:0000313|EMBL:EMS94835.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 60.0
  • Bit_score: 108
  • Evalue 2.80e-21
Helicase subunit of the DNA excision repair complex similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 60.0
  • Bit_score: 99
  • Evalue 2.90e-19

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGTCCAACGATCTTTCTCTCGCACAGAACCACGCCTTCCAGCTTGCCCGCACCCTCATGGTTCCAGTCACGCTCTTCAGGTCCGGCGGTGAATTCGGCGTCCTCCCGAGCGCCGAACTCGAAGACGACGAGGTCGAGACGCTCATCGAATATGATCCCTTCCACATCGGGCCGGCTCATTGA
PROTEIN sequence
Length: 61
MSNDLSLAQNHAFQLARTLMVPVTLFRSGGEFGVLPSAELEDDEVETLIEYDPFHIGPAH*