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SCNpilot_expt_1000_bf_scaffold_1762_20

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 15139..15942

Top 3 Functional Annotations

Value Algorithm Source
2-methylisocitrate lyase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003149BF6 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 269.0
  • Bit_score: 413
  • Evalue 1.70e-112
  • rbh
2-methylisocitrate lyase {ECO:0000313|EMBL:EZQ14736.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 262.0
  • Bit_score: 428
  • Evalue 7.10e-117
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 266.0
  • Bit_score: 407
  • Evalue 3.80e-111

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGGACAAGGGCAAGGTTTTTCGTGAGCTTCACGCTTCCACATTCGTCATTCCGAACCCGTGGGATATCGGCACCGCCAAGCTTTTGCAGTCCTTTGGCTTCAAGGCGCTGGCGACGACCAGCGCCGGCTTCGCCTTTTCGCGCGGACTGCCTGATGGCGGAGTGAATTTCGAGACGATGATTGCCCACTGCAAGGAACTTGCAGCGGCAACCGACCTGCCGGTGTCGGCGGATCTGGAGAAGGGCAAGGGCGATAGCCCGGAGCGCGCCGCGGAAACCATATTCGCCGCCGAGGCGGCAGGCCTGGCCGGCTGCTCGATCGAAGACTTTTCCGGTGACGACGACCGTCCGATCTACGAATTCTCTCATGCGGTCGAACGTGTGGCGGCGGCGGTCGAGGCGGCGCGGGCCTTGAAGAACGACTTCGTCTTCACGGCGCGTGCGGAAAATTTCCTGCATGGCATCAACGATCTCGACAACACCATCAGGCGCTTGCAGGCGTTCGAGAAGGCAGGCGCCGACGTGCTCTATGCACCGGGCATCACGGATATCGATGCGGTGCGCACCATCTGCTCCTCCGTTTCGAAGCCGGTCAACATTCTCGCCGTCCCGGCCTTCACCGTAGCGGAGCTCGCCAAGGCCGGAGCAAAGCGCATATCGCTTGGCTCCAAGCTGACCAATTATACGTTCGGTGCGCTGGAACGTGCATCGAAGGAAATTCTGGACAGCGGTTCGTTCACATTCAGCCGGGACGCCATGGCCTATGACCGGCTGCAGAAGATGTTTGCAACTTCGGAAGGCTGA
PROTEIN sequence
Length: 268
MDKGKVFRELHASTFVIPNPWDIGTAKLLQSFGFKALATTSAGFAFSRGLPDGGVNFETMIAHCKELAAATDLPVSADLEKGKGDSPERAAETIFAAEAAGLAGCSIEDFSGDDDRPIYEFSHAVERVAAAVEAARALKNDFVFTARAENFLHGINDLDNTIRRLQAFEKAGADVLYAPGITDIDAVRTICSSVSKPVNILAVPAFTVAELAKAGAKRISLGSKLTNYTFGALERASKEILDSGSFTFSRDAMAYDRLQKMFATSEG*