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SCNpilot_expt_1000_bf_scaffold_1992_3

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 2793..4229

Top 3 Functional Annotations

Value Algorithm Source
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 475.0
  • Bit_score: 578
  • Evalue 9.90e-162
selA; L-seryl-tRNA selenium transferase SelA (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 465.0
  • Bit_score: 566
  • Evalue 8.70e-159
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXY5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 475.0
  • Bit_score: 578
  • Evalue 7.10e-162
  • rbh

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGGCTTCCGGCGCAATTTCACTGCCGCAGCGGCGACTTCCTTCGGTCGACCAGTTGCTTCGCCTTGACGAGGCGGTTGTCGCAGTCAGGCTGTTTGGCCATGCGCAGGTCGTGGCGGCCCTTCGCGAAAGCTTGCAATCTTTGCGTGACGCGATGGCAGGGGTTGACGGGCACGGCATCGAAGGGTCCGTTCCGGCAATCGACGATATTTTGAGCGAAGCGATCGCTCGTCTCGAAGCGCGCGCAGCGCCTCGGGTTCGGCAGGTTTTCAATCTGACCGGTACAGTTCTTCATACCAATCTCGGCCGCGCCATTTTGGCGGAGGAAGCAATCGAGGCGGCAGCGCGGGCCATGCGGAACCCGACTGCGCTGGAGTTCGACCTTGGCAAGGGCAGACGCGGAGAACGGGACGAGCTTGTTCGCGGGCTCCTCAGCGAGCTGACGGGTGCGGAAGACGCCACCGTAGTCAACAACAATGCCGCCGCAGTGCTGCTTACGCTCAATACCCTCGCCGACGGCCGCAATGCGGTCATCTCGCGAGGTGAGTTGATCGAAATCGGTGGTGCATTTCGCATGCCCGATATCATCGCCGCCGCAGGCTCACGCATTGTTGAAGTCGGCACGACCAACCGCACCCATTTACGTGACTATGCCCGGGCGATAGGGCCTGATACGGGTTTGCTACTGAAAGTGCATACATCGAACTATCGCATACAGGGCTTCACGAAGGAGGTTCCCGCCCCCGAACTGGCCTTGCTTGCGAAAGAGCATAGCACCCTTCTGGTCAACGATCTCGGCTCAGGGACGCTTGTTGACCTTTCGCGTTTTGGCCTTTCGAAGGAGCCGACCGTGGCCGACGCCGTTCGCGAAGGTGCTGACATCGTTACATTCTCCGGCGACAAGCTGTTGGGCGGACCGCAGGCAGGTTTCATCATCGGTCGCCGTGAACTGATCGCGCGCGTCAACCGCAATCCGATGAAGCGTGCGATGCGTGTCGACAAGATCAGGCTGGCGGCGCTTGAGGCGACGCTGCGCCTCTATCTTCATCCTGAACGGCTGACTGAGCGGCTGCCGACCTTGCGGCATCTTGTGCGTTCCCCAGCCGAGATCGAGGCCCTTGCACAGAACATCATGCCTGCCGTGGCGGCAGCGGTCGGCAGTGGGTTCTCCGTTGAGGTGGCCGCTTGCGCAAGCCAGATCGGATCGGGTGCGCTGCCGCTCGAAACCGTTCCCAGCTTTGGTCTTGCAATACGTTCCGCCGATCCGAAAGCAAGTGGGCAAGCGATCGCCAGCTTGACAGCGGCATTTCGCGACCTGCCGGTCCCTGTCATCGGTCGTATCGCGGATCAGGCCCTGATCTTCGACCTGCGATGCCTTGAAGATCTCGCCGCCTTCACGTCCAATCTCTCGCACCTTGAGCTATCGGGGGTGCAGTAA
PROTEIN sequence
Length: 479
MASGAISLPQRRLPSVDQLLRLDEAVVAVRLFGHAQVVAALRESLQSLRDAMAGVDGHGIEGSVPAIDDILSEAIARLEARAAPRVRQVFNLTGTVLHTNLGRAILAEEAIEAAARAMRNPTALEFDLGKGRRGERDELVRGLLSELTGAEDATVVNNNAAAVLLTLNTLADGRNAVISRGELIEIGGAFRMPDIIAAAGSRIVEVGTTNRTHLRDYARAIGPDTGLLLKVHTSNYRIQGFTKEVPAPELALLAKEHSTLLVNDLGSGTLVDLSRFGLSKEPTVADAVREGADIVTFSGDKLLGGPQAGFIIGRRELIARVNRNPMKRAMRVDKIRLAALEATLRLYLHPERLTERLPTLRHLVRSPAEIEALAQNIMPAVAAAVGSGFSVEVAACASQIGSGALPLETVPSFGLAIRSADPKASGQAIASLTAAFRDLPVPVIGRIADQALIFDLRCLEDLAAFTSNLSHLELSGVQ*