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SCNpilot_expt_1000_bf_scaffold_1992_10

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 11434..11943

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter small transmembrane protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0ULL6_MYCVA similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 164.0
  • Bit_score: 92
  • Evalue 4.20e-16
Uncharacterized protein {ECO:0000313|EMBL:KKB86685.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 168.0
  • Bit_score: 218
  • Evalue 9.20e-54
tripartite ATP-independent periplasmic transporter DctQ similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 167.0
  • Bit_score: 79
  • Evalue 1.50e-12

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCTGAAGAAACTGAACTCGCCGCCACGGACTTCGAAATGAGCCCGCCACCTGCTGGTCGGTTTTCAAAGGGCCTCAATTTCGTCCTCGAAAACCTTGCAATGGCGTTGATGGCAATCCTGACGCTGCTGGTGTTTGCCAACGCCTTCTCAAGATACGCCTTCTCTGCGCCGCTTCCGTGGACTGAAGAAGCCGTGACCTATCTGCTGGTCTGGCTGGCAGCGGTGGGCATCATCATCGCGGGCCTGCGCCAGACACTGATTTGCTGTGACATCGTTACCTACCGGCTGCGGCCGGGGCCCCAGCGGATCGTCGCGACCTTCTGCGCGCTCCTTGGATCGGCGACCATGTTCTACTGCGCCTGGTTGACCTGGCAATATCTGCAGATCTTCGGGTCCGACCTCAGTCCTGTCCTGCGCATACCCAAGGGCGTGTTGATCTCTGCCTTGTTGGTAGCGCTGCTTGGCCTGGCGGTAACCCTCCTCGTCCCGCTTTTCAGGAGGAAGTAG
PROTEIN sequence
Length: 170
MAEETELAATDFEMSPPPAGRFSKGLNFVLENLAMALMAILTLLVFANAFSRYAFSAPLPWTEEAVTYLLVWLAAVGIIIAGLRQTLICCDIVTYRLRPGPQRIVATFCALLGSATMFYCAWLTWQYLQIFGSDLSPVLRIPKGVLISALLVALLGLAVTLLVPLFRRK*