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SCNpilot_expt_1000_bf_scaffold_1035_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 3290..3835

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 5.90e-85
  • rbh
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 1.90e-85
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87779.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 8.30e-85

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCCGCCTGTCTCCAGCGCCGCGCATGACGGCGACGACGTGCGCGCCGCAGCCGCGGGCGACCGTCGCGCCTTCCAGCGCCTGTACGCGCTGCACGTCGGCCGCGTCTACGGCGCGCTGCACCGGCTGGCCGGCTACGACCACGCGCGGGCGGAGGATCTCACCCAGGACGCCTTCATCCGCGCCTGGCAGAAATTGCCCGGCTTCCGCCACGAAAGCTCCTTCGGCACCTGGCTGTATCGCCTGGCGGTCAACGTGGCGCTGATGGACATCCGCGCGCGCGGCGCCGATCCGGTGCGCGTAGTGGACGACGAGCACCTGCCGGACAGTGGCGAGACGCCGTTCTGCGCGGCCGAGCGACACGAACTGGAACAAGCCATCGGCAGGCTGCCGCCGCGCGCCCGCGCCGTACTGGTACTGCACGACATCGAAGGCTGGCGGCACGAGGACATCGGCGACGAACTGGGCATGGCGGTGGGCACCTCGAAGGCTCAACTGCATCGCGCACGCCAGCTGCTGCGCAAGACGCTGGGAGAAAACGCATGA
PROTEIN sequence
Length: 182
MPPVSSAAHDGDDVRAAAAGDRRAFQRLYALHVGRVYGALHRLAGYDHARAEDLTQDAFIRAWQKLPGFRHESSFGTWLYRLAVNVALMDIRARGADPVRVVDDEHLPDSGETPFCAAERHELEQAIGRLPPRARAVLVLHDIEGWRHEDIGDELGMAVGTSKAQLHRARQLLRKTLGENA*