ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1205_28

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(23958..24521)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal body-associated protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBD5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 168.0
  • Bit_score: 181
  • Evalue 7.60e-43
Flagellar basal body-associated protein {ECO:0000313|EMBL:EIL96776.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 168.0
  • Bit_score: 181
  • Evalue 1.10e-42
flagellar basal body-associated protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 176
  • Evalue 7.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCACGCGGATTGCTTTCCATCTCGCAAGCCGGCGACGGCAGCCCCGATCCCCACACGAGATTCTCCATGAGCGACGACGAAGCACCCGAGGTAGTGGAAGACGAAGAGCTGGTACCGAGCCGGCGTTCGCCCTTGCTGATCGGAATCGTGGCGGTGCTGCTCGTCGCGCTGGCCGGCGGCGGCTACTACTGGCAATCGCATCGCGCCGGATCGGACAAGCAGGCGAAGGCGGAGGCGAACAAGCCGGAGATTTTCCTGGCGATGGACCCGGCGTTCGTGGTCACCCTGCGCGATGGCGATGCGCTGCGTTACCTGCAGGTGGGCGTGACCCTGATGGCGCACGACCAGCAGGCCATCACGGTGGCCAAGGACGTCGACCCGATCCTGCGTGACGGGCTGGTTTCGCTGTTCAGCAGCCAGAAGTTCGAGACGGTCAGCGAGACCGCCGGCCGCGAGAAGCTGCAGGCCGACGCGCTGGCCGAGGTGCGCAAGGTGGTCGGCAAGCGGCTCGGCCGGCCGGGCATCGACGCGCTGTATTTCACCAGCTTCGTGATCCAGTAG
PROTEIN sequence
Length: 188
MARGLLSISQAGDGSPDPHTRFSMSDDEAPEVVEDEELVPSRRSPLLIGIVAVLLVALAGGGYYWQSHRAGSDKQAKAEANKPEIFLAMDPAFVVTLRDGDALRYLQVGVTLMAHDQQAITVAKDVDPILRDGLVSLFSSQKFETVSETAGREKLQADALAEVRKVVGKRLGRPGIDALYFTSFVIQ*