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SCNpilot_expt_1000_bf_scaffold_1720_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(561..3044)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion/conjugal transfer ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXM4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 822.0
  • Bit_score: 1500
  • Evalue 0.0
  • rbh
Type IV secretion/conjugal transfer ATPase {ECO:0000313|EMBL:EIL91965.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 822.0
  • Bit_score: 1500
  • Evalue 0.0
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 810.0
  • Bit_score: 1362
  • Evalue 0.0
  • rbh

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2484
ATGCCCAAGCCAAAACCCGTATTCATGCCGGACACGCCCATCGCCGAGTTCCTGCCCCTGTCGACGCACGTGTCACCGACCGTGCTCAAGAGCACGGGCGGCGATTTCCTGCTGGTGTGGCGCCTGGGCGGGCTGCCCTTCGTGGGGCGCGAGGAATGGGAGATCGAGCACCGCCACAACACCTTCAATCGGCTGCTGCAAACCCTGCGCGCGCCCGACTTCGTCAACGTGGCGTTCTGGGTCCACGACGTGCGCCGGCGCCGGCGCCTGGATGACTGTAGCCGCTTCGTGCAGCCCTTCAACCAGGATCTGTCCGATACCTATTACAAGGGCTTGTCCGCGCAAAAGCTGATGCAGAACGAGCTGTATCTGACTCTGATGTACCGCCCCATCGTCAGCGGCAGGCGCTTCGTGGAGAAGTCGGCCGATCTCGCCCGCCTGGAGTCCGAACAGCGCGACGCGGTGAACACCGTGCTCGAACTGGCCGGAAACCTGGAAGCCGTGCTGAAGGATTACGCACCCAGCCGACTGGGCATGTACGAAGCGGCCAACGGCGTCGTGTTCTCCGAGGCGCTGGAGTTGTACGGCTACCTGCTCAACCGCATCGACGAACCGGTGCCCGTGCTCAGCGCCCCCGTGTTCGACTACCTGCCGGTCAGCAAGCAGCGCTTCTCGGCCAAAACCGGCGACTACGTGATCACCACGCCCGACGGCATCAATCACTTCGGCGCCATCCTCAACATCAAGGAATACACCGACGGGACCTACCCGGGCATCCTCAACAGCCTGAAGTACCTCGATTTCGAATACGTCATCACCCATTCCTTCAGCCCCATGGGCCGGCAGGATGCACTCAAGGCGCTGGATCGCACCAAGGGCATGATGATCTCCTCCGGCGACAAGGCCTTCAGCCAGATCGCCGAGCTCGACCACGCCATGGATCAGCTCGCCTCCGGCAATTTCGTGCTGGGCGAGTACCACTTCTCCATGGCCATCTATGCCGCCAGCCAGGAAGCGCTGTCGCAGCAGATCGCCAGCACCCGTGCCGAGTTGTCGAACGCGGGATTCGTCTCGGTCAAGGAGGATCTGGCCGTCACCGCGGCGTTCTACGCCCAGTTCCCGGGCAACTGGAAATACCGCACGCGCCTGGCCAACGTCAGCTCACTCAATTTCCTCGGCTTGTCGCCGCTGCACAACTTCGCCACCGGCAAGAAGGAGAACAACCCCTGGGGCGACTGCGTCACCACCCTGCAGACCACCAACGGGCAGGCGTATCACTTCAATTTCCACGCCACCCATCCGGCGGAGAACTCGCTCGGCGAGAAGGCCATCGCCAACACCATGGTCATCGGCAAGTCCGGCACGGGCAAGACCGCGTTGATCAACTTCCTGCTGAGCCAAGTGCAGAAATTGCAGCCTTCGCCCACGATTTTCTTCTTCGACAAGGATCGCGGTGCCGAGATCTTCGTTCGCGCCTGCGGCGGCAACTACCTCGCACTGGAAAACGGCAAGCCCACCGGCTTCAACCCTTTCCACTGCGAACGCAACGAAACCAACGTGCAGTTCCTGGCCGATCTGGTAAAGGTGATGGCCGGCAAGAGCGTCTACAGCTCGCGCGAGGAAGAGGACATCTTCCGCGCCGTCGAGAACATGCTCGATACGCCCATGCATCTTCGCACGTTGACCAACTTCCAGAAGAGCCTGCCCAACATGGGCGACGACGGCCTGTTCATCCGCATGCGCAAGTGGACGGCAGGCAATTCGCTGGGTTGGGTATTCGACAACCCGGTCGACACCATCGACCTTGAGAAAGCCAACATCATCGGCTTCGACTACACCGAGCTGATCGACAATCCCGAAGCGCGAGTGCCGGTCATCAACTATCTGCTGCACAGGCTGGAGGCGCTGATCGACGGCCGCCCGCTCATCTACGTGATGGACGAGTTCTGGAAGATCCTCGACGGCAAGGGTGGGCTCAAGGAATTCGCCAAGAACAAACAGAAGACGATCCGCAAGCAGAACGGCCTGGGCATCTTCGCCACGCAAAGCCCCGAGGACGCGCTGGCCAGCGACATCGCCGCGGCGCTGATCGAGCAGACCGCCACGATGATCCTGCTGCCCAACCCGAACGCCAGCCGCGAGGATTACGTCGACGGCCTGAAACTGACCGACGCCGAATACCAGGTCGTGGTGAGCCTGGACGAGCGTTCACGTTGCTTCCTGGTCAAGCAGGGCCACGCCAGCGCGGTGTGCCAGCTGAACCTGCGCGGCATGGACGACGCTCTCGCCGTGATCTCGGCCTCCACCGACAACATCGAAATCATGCACGAGGTGCTGCGTGGATGTGCTGCCGCCGAAGGCGTCACCGTTGACGAACTGCGCCCCGAACAGTGGCTCGAGCGCTTCTACGAAAACCGCAGGGGCAGCGGAAAGCAAAAGCCCAACCAACCAACCCCGCGCACACCACGCGCCGCCGTTCGCTGA
PROTEIN sequence
Length: 828
MPKPKPVFMPDTPIAEFLPLSTHVSPTVLKSTGGDFLLVWRLGGLPFVGREEWEIEHRHNTFNRLLQTLRAPDFVNVAFWVHDVRRRRRLDDCSRFVQPFNQDLSDTYYKGLSAQKLMQNELYLTLMYRPIVSGRRFVEKSADLARLESEQRDAVNTVLELAGNLEAVLKDYAPSRLGMYEAANGVVFSEALELYGYLLNRIDEPVPVLSAPVFDYLPVSKQRFSAKTGDYVITTPDGINHFGAILNIKEYTDGTYPGILNSLKYLDFEYVITHSFSPMGRQDALKALDRTKGMMISSGDKAFSQIAELDHAMDQLASGNFVLGEYHFSMAIYAASQEALSQQIASTRAELSNAGFVSVKEDLAVTAAFYAQFPGNWKYRTRLANVSSLNFLGLSPLHNFATGKKENNPWGDCVTTLQTTNGQAYHFNFHATHPAENSLGEKAIANTMVIGKSGTGKTALINFLLSQVQKLQPSPTIFFFDKDRGAEIFVRACGGNYLALENGKPTGFNPFHCERNETNVQFLADLVKVMAGKSVYSSREEEDIFRAVENMLDTPMHLRTLTNFQKSLPNMGDDGLFIRMRKWTAGNSLGWVFDNPVDTIDLEKANIIGFDYTELIDNPEARVPVINYLLHRLEALIDGRPLIYVMDEFWKILDGKGGLKEFAKNKQKTIRKQNGLGIFATQSPEDALASDIAAALIEQTATMILLPNPNASREDYVDGLKLTDAEYQVVVSLDERSRCFLVKQGHASAVCQLNLRGMDDALAVISASTDNIEIMHEVLRGCAAAEGVTVDELRPEQWLERFYENRRGSGKQKPNQPTPRTPRAAVR*