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SCNpilot_expt_1000_bf_scaffold_1720_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(3399..3806)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034780F2 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 135.0
  • Bit_score: 176
  • Evalue 1.30e-41
Putative type IV secretion system protein {ECO:0000313|EMBL:EIL91963.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 130.0
  • Bit_score: 158
  • Evalue 5.30e-36
putative type IV secretion system protein; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 134.0
  • Bit_score: 111
  • Evalue 2.90e-22

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCCAACACCTCCCTCGGCAACGAAAGCATCCTCACCTCCTCGCGCACGCGCTGGTTCACGTTCCTCTCTGTGGCCATGCTGCTGGCGTTGGTCCTGCCCAACCTCGCGCTCGCGCAGGATGCCACCGGCACGATTGATACCACCTGCAAGTTCGCCACCAACATCAACATGATCCTCAACGCGATCTCGGTCGTGGTGGTGACGATCGCCATCGTGTTCTCCGGTTACCAGATCGCCTTTGCCCACAAGCGCATCGGCGATGTCGCCCCGGTGCTTATCGGTGCGGTGCTGATCGGCGCGGCGGGCCAGATCGCCAAGATGTTCCTCGCCGGCAGCACGACCGACGCCGGCGCCACGCAGTGCACCGCCAGCGTGCTCGTCCACGCGCTCCACTTCTATGCATAA
PROTEIN sequence
Length: 136
MANTSLGNESILTSSRTRWFTFLSVAMLLALVLPNLALAQDATGTIDTTCKFATNINMILNAISVVVVTIAIVFSGYQIAFAHKRIGDVAPVLIGAVLIGAAGQIAKMFLAGSTTDAGATQCTASVLVHALHFYA*