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SCNpilot_expt_1000_bf_scaffold_1720_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(4002..4964)

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV secretion system conjugal protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXM1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 339.0
  • Bit_score: 306
  • Evalue 3.50e-80
  • rbh
Putative type IV secretion system conjugal protein {ECO:0000313|EMBL:EIL91962.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 339.0
  • Bit_score: 306
  • Evalue 4.90e-80
putative type IV secretion system conjugal protein; K03194 type IV secretion system protein VirB1 similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 347.0
  • Bit_score: 237
  • Evalue 6.20e-60

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGCTGCCCGGGATGGAAATGCTGGCCTGCCCCAACCTGGCCGTGTCGCCTCAGGTGATGCAGCACATCGTGCAGGTCGAATCCGGCGCCAATCCCTATGCGATCGGCGTCGTCGGCGGCAAGCTCGCGCGCCAGCCGCACAGCATGGAAGAGGCCCTGGCCACCGCACGCATGCTGGAGAGCCGTGGCTACAACTTCTCCGTTGGCATTGCCCAGGTCAACCGCGCCAACCTGGGCCACTACGGACTGGATTCCTACCGCAAGGCCTTCAGCGCGTGCGACAACCTGGCCGCGGGCGCGCAGATCCTCGCCCGCTGCCACGACAGCGCCCATGGCGACTGGGGCAAGGCCTTCAGCTGTTACTACTCCGGCAACTTCACCACCGGCTTCCGCGACGGCTACGTGCAGAAGGTATACGCCTCGATGAACCGCGTGGCCGAAGCCCGACTGGCGACCACGACATCCGTTCCCGAAGTCGCGGCCATTGCGCCGACACGCGCGCCACCCCCCGCAGAAATCGTCGCCGGCAGAAGCGCCGTACCGCCGCTGGTGGTCTATTCCGGTGACAACGCCAACTATCGGATCGCACTGCGCAGCGTGCCGATGGCAGCCGTCGCGAAGGAACCTGCATCACGGCCGAACCCGTTCACGCCACGCGATATCGGCGGCGAAGCTGCGTCCGCTGCGGCAGTCTCCACGGCGGGCTTGTCCGGCGCCAACGCAGACCCTGCCGTCCTGCCGCAGCACAGCGTTGCGCCCTCTTCACCCTCGACCGCCCCTGCCCGCCAGCCTGCCCCGCCCGGGCTCGCCGGCACGACCACCGGCGGCGTGTTCGAACCGCAGGTGCGCGGCCCCGGTGACCCGGCTGTGGCGTCAGCCGTGCCGGCTGCAGGCACACCCGCCCCACGGCACGACCGCGCCGACTTGCGCATGGAGCAGCGCGATGCCGCCTTTGTCTTCTGA
PROTEIN sequence
Length: 321
MLPGMEMLACPNLAVSPQVMQHIVQVESGANPYAIGVVGGKLARQPHSMEEALATARMLESRGYNFSVGIAQVNRANLGHYGLDSYRKAFSACDNLAAGAQILARCHDSAHGDWGKAFSCYYSGNFTTGFRDGYVQKVYASMNRVAEARLATTTSVPEVAAIAPTRAPPPAEIVAGRSAVPPLVVYSGDNANYRIALRSVPMAAVAKEPASRPNPFTPRDIGGEAASAAAVSTAGLSGANADPAVLPQHSVAPSSPSTAPARQPAPPGLAGTTTGGVFEPQVRGPGDPAVASAVPAAGTPAPRHDRADLRMEQRDAAFVF*