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SCNpilot_expt_1000_bf_scaffold_1720_13

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(12764..13240)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDD4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 142.0
  • Bit_score: 224
  • Evalue 6.60e-56
Ribonuclease D {ECO:0000313|EMBL:EIL97475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 142.0
  • Bit_score: 224
  • Evalue 9.20e-56
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 142.0
  • Bit_score: 222
  • Evalue 1.30e-55

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
TGGCGCGACAGCTGCGCCCGCCGCCTCGACGTACCGCGCCCGTGGCTGCTGGACGACACCCTCGCCCTCAGCCTGGCGCAGCAACCGCCGGCCACGCTGGCCGAACTGGAGCAACGCGCCCGTGGCCAGCGCGCACTGCGCTCGGCCCAGCGCAGCGAGCTGTTCGAGGTGCTCGCGCCCGCCGTCACCCCGGCGGAGATCGACGCCACCGCCCGCATCCCCGGTCATCCGCAGGGCGCCGCCAAGCAGGCGCTGGCGGCGATGAAGCAGTCGGTCGACACGCTCGCCACCGAACTCGACCTGCCGCCCGGCCTGCTGTGCCCGCGCAAGGTGCTGGAGGAATACGTGGTCACCGCCGAATGGCCCGAATCCCTCGACGGCTGGCGCCACGACCTGCTGCACCCGCGCCTCGCCAGCCTGCTGCCCGACCGCCCCGCGACAAGCCGACCAGTTGCCAAGCCCTCAGCCGGCGATTAA
PROTEIN sequence
Length: 159
WRDSCARRLDVPRPWLLDDTLALSLAQQPPATLAELEQRARGQRALRSAQRSELFEVLAPAVTPAEIDATARIPGHPQGAAKQALAAMKQSVDTLATELDLPPGLLCPRKVLEEYVVTAEWPESLDGWRHDLLHPRLASLLPDRPATSRPVAKPSAGD*