ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1363_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 2943..3776

Top 3 Functional Annotations

Value Algorithm Source
Pirin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC35_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 277.0
  • Bit_score: 515
  • Evalue 2.50e-143
  • rbh
Pirin {ECO:0000313|EMBL:EIL97026.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 277.0
  • Bit_score: 515
  • Evalue 3.50e-143
Pirin-related protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 277.0
  • Bit_score: 502
  • Evalue 1.20e-139
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAGCGATCGCACCATCACCCGCCGCATCCGCGGCACCGACACCTCCGACGGCGCCGGCGTGAAGCTCAAGCGCATCATCGGCCAGCCCGGGCTGGACATGCTCGACCCGTTCCTGTTGCTGGACGAATTCCGCTCCGACAGCGCCGATGACTACATCGCCGGCTTCCCCGAACACCCGCATCGCGGCTTCGAGACGGTCACCTACATGCTCGCCGGCCACATGCGGCACGGCGACAACCATGGCAACCGCGGCGACCTCACGCCGGGCAGCGTGCAGTGGATGACCGCCGGCCGCGGCATCCTGCACTCGGAAATGCCGCAGCAGGAAAACGGCCTGATGTGGGGCTTCCAGCTGTGGGTGAATTTGCCGGCGAAGGACAAGATGACGGCGCCGCGCTACCAGGACATCGCCCCGGAGCGGATTCCGGTGGTGCATCCGGCCGACGGCGTCGAGGTCAAGGTGATCGCGGGCGAGCTGGCCGGCGCCACTGGACCGGTCGAAGGCATCGCCACCGCGCCGGTGTATCTCGACGTCAGCCTGCAGCCCGGTGCGCGGTTCGCGCTGGCGTTGCCCGTCGGCCACCACGGTTTCACCTACGTGTTCGAGGGCGAATCGGCGCTGGTCGGTGGCGAACGGCTGCAACGCAGCGAGCTGGGCGTGCTGTCCGATGGCGAACAATTGCAGCTGGCCGGCGGCGACAAACCCTCGCGCCTGCTGGTCGTCGCCGGCAAGTCGCTGAACGAACCGGTGGCCCGCTACGGTCCGTTCGTGATGAACACCCAGGCGCAGATCCACGAGGCGATCACGGATTTCCGGGCGGGCCGGTTCTAA
PROTEIN sequence
Length: 278
MSDRTITRRIRGTDTSDGAGVKLKRIIGQPGLDMLDPFLLLDEFRSDSADDYIAGFPEHPHRGFETVTYMLAGHMRHGDNHGNRGDLTPGSVQWMTAGRGILHSEMPQQENGLMWGFQLWVNLPAKDKMTAPRYQDIAPERIPVVHPADGVEVKVIAGELAGATGPVEGIATAPVYLDVSLQPGARFALALPVGHHGFTYVFEGESALVGGERLQRSELGVLSDGEQLQLAGGDKPSRLLVVAGKSLNEPVARYGPFVMNTQAQIHEAITDFRAGRF*