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SCNpilot_expt_1000_bf_scaffold_1448_8

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 3863..4390

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ59_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 175.0
  • Bit_score: 331
  • Evalue 5.50e-88
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 175.0
  • Bit_score: 331
  • Evalue 7.70e-88
SSU ribosomal protein S3P similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 320
  • Evalue 3.10e-85

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
GTGATCGGCAAGAAGGGCGAGGACATCGAGAAGCTGCGCAAGGAAGTCAGCGACATGATGGGCGTCCCGACGCACATCAACGTCAACGAGGTGCGCAAGCCCGAGCTGGACGCGCAGCTGGTGGCAGAGTCCATCGCGCAGCAGCTGGAGCGCCGCATCATGTTCCGCCGCGCGATGAAGCGCTCGGTCGGCAACGCGATGCGCCTGGGCGCCCTGGGCATCAAGATCAACGTCTCCGGCCGCCTGAACGGCGCCGAGATCGCCCGCTCCGAGTGGAGCCGCGAGGGTCGCGTGCCGCTGCATACGCTGCGCGCCGACATCGACTACGGTTTCGCCGAGGCGAGCACCACCTACGGCATCATCGGCATCAAGGTCTGGGTGTACAAGGGCGAGATCTTCGATCTGGCCGCTGCCAGCCAGGAGTCGAAGGACGAACCGTCGCCGTCGCGCCGTGAAGGTGGCGAAGGCCGTCGTAATGATTCGCGTCGCGAGGCCGGTGAAGGCCGTCGCGAGCGGTCTGCGAAGTAA
PROTEIN sequence
Length: 176
VIGKKGEDIEKLRKEVSDMMGVPTHINVNEVRKPELDAQLVAESIAQQLERRIMFRRAMKRSVGNAMRLGALGIKINVSGRLNGAEIARSEWSREGRVPLHTLRADIDYGFAEASTTYGIIGIKVWVYKGEIFDLAAASQESKDEPSPSRREGGEGRRNDSRREAGEGRRERSAK*