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SCNpilot_expt_1000_bf_scaffold_1448_25

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 12145..12771

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM94_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 208.0
  • Bit_score: 406
  • Evalue 1.60e-110
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 208.0
  • Bit_score: 406
  • Evalue 2.30e-110
SSU ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 208.0
  • Bit_score: 402
  • Evalue 7.30e-110
  • rbh

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCACGTTATCGTGGAGCTACCTGCAAACTCGCCCGGCGCGAAGGTGCGGATCTCAGCCTGAAGAGCCCGGCGCGTGCGCTGGATTCAAAGTGCAAACTGGAAAACAAGCCCGGCCAGCATGGCGCGAACAAGCGCATGCGCATGTCCGACTACGCCGTCCAGCTGCGTGAGAAGCAGAAGGTCAAGCGTATCTACGGCGTGCTCGAGCGCCAGTTCAGCAACTACTACACCAAGGCGACCACGCTCAAGGGCAATACCGGCGAGAACTTGCTGCGTCTGCTCGAGAGCCGCCTGGACAACGTCGTGTTCCGCATGGGCTTCGCGGTCACCCGCGCCCAGGCCCGCCAGCTGGTTGCCCACAAGGCGGTGCTGGTCAACGGCAAGAAGGTGAACATTCCTTCCTACCAGGTGCGCCCGGGCGACGCGATCGCGCTGACCGAGAAGGCGCGCAGCCAGCTGCGCGTGCAGGAAGCGGCCACCGTGTTCGACACCATGGACCTGCGCCCGGTCTGGGTCGAAGTGGATTCCAAGAAGTTCGAAGGCACGTTCAAGTCGGTGCCGGATCGCGGCGACCTGCCGTCCGACATCAATGAAGCATTGATCATCGAGCTTTACTCGAAGTAA
PROTEIN sequence
Length: 209
MARYRGATCKLARREGADLSLKSPARALDSKCKLENKPGQHGANKRMRMSDYAVQLREKQKVKRIYGVLERQFSNYYTKATTLKGNTGENLLRLLESRLDNVVFRMGFAVTRAQARQLVAHKAVLVNGKKVNIPSYQVRPGDAIALTEKARSQLRVQEAATVFDTMDLRPVWVEVDSKKFEGTFKSVPDRGDLPSDINEALIIELYSK*