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SCNpilot_expt_1000_bf_scaffold_1514_29

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(31284..33314)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion ATPase, ClpV1 family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0S5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 671.0
  • Bit_score: 1257
  • Evalue 0.0
Type VI secretion ATPase, ClpV1 family protein {ECO:0000313|EMBL:EIL93066.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 671.0
  • Bit_score: 1257
  • Evalue 0.0
type VI secretion ATPase, ClpV1 family; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 690.0
  • Bit_score: 1003
  • Evalue 3.00e-290

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2031
ATGGCCGAGATCAGTCGCGGCGCGCTGTTCGGGAAACTCAACAAGCTCGCTTTCCGGTGCATCGAAAGCGCGACGGTGTTCTGCAAGCTGCGCGGCAATCCGTACGTGGAACTGGTGCACTGGATCCACCAGATCCTGCAGTTGCAGGATTCGGACCTGCACCGCATCGTCAAGCAGTTCAACCTCAACCCGTCGAACCTGGCGCGCGACATCACCGATGCGCTGGACCGGCTGCCGCGCGGCTCCTCGTCCATCTCCGATCTGTCCAGCAACGTCGAGGAAGCGGTCGAGCGCGGCTGGGTGTTCGCCACGCTGATGTTCGGCGAGGCGCAGGTGCGCACCGGTTACCTGATCGTCGGCTGCCTGCGCACGCGCAATCTGCGCAACGCGCTGGTCAACATCTCGGCCGAGTTCGACAAGATCAAGCCCGAGGCATTGGTGGAGAAGTTCGCCGAGGTGGTCGGCGGCTCGCCCGAGGACGGGCAGCATGCGAACGACGGTTTCCGCATGGGCGGTGGCAGCGCGCCGGGCGAGGCAAGCGGCGCGATGTCGCCGGCACAGATGGGCAAGCAGGAAGCGCTGGCGCAGTTCACCATCGACCTCACCGCGCAGGCGCGCGACGGCAAGATGGACCCGATCGTCGGTCGCGACGACGAGATCCGCCAGCTGGTCGACATCCTCATGCGCCGTCGCCAGAACAACCCGATGCTGGTCGGCGAAGCCGGCGTGGGCAAGACCGCGGTGATCGAGGGCTTTGCCATGCGCATCGCCATCGGCGACGTGCCGCCGCCGCTGAAGGACGTGCAACTGCGCGTGCTCGACGTGGGTCTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAGTTCGAGAACCGCCTGAAGCAGGTGATCGAGGAGGTGCAGTCGTCCACCAAGCCGATCATCCTGTTCATCGACGAGGCGCACACCCTGGTCGGCGCCGGCGGCGCGGCCGGCACCGGCGACGCGGCGAACCTGCTCAAGCCCGCACTGGCGCGCGGCAACCTGCGCACGATCGGCGCCACCACCTGGGCGGAGTACAAGAAGCACATCGAGAAAGACCCCGCGCTGACCCGCCGCTTCCAGACCGTGCAGATCGACGAGCCCAGCGAGGAGAAGGCGATCCTGATGATGCGCGGCGTCGCCAGCGTGATGGAGAAGCACCACAAGGTGCAGATCCTCGACGAGGCGCTGGAGGCGGCAGTGAAGTTGTCGCACCGCTACATTCCCGCGCGCCAGTTGCCGGACAAGTCGGTCAGCCTGCTCGATACCGCCTGCGCCCGCGTGGCGATCAGCCAGCACGCCGTGCCGGCCGAGGTGGACGACACCCGCAAGCGCATCCAGGCGCTGGAGACCGAGCTGGGCATCATCGCGCGCGAAAAGAACGTCGGCGTGAACGTCACTGCCCGCGAAGACGCCGCCAACGAGAAGCTGGCCACGCAGAAGGCACGACTGGAAACGCTGGAGGCGAACTGGATCAAGGAGAAGGATCTGGTCGAGAAGATCCTCGACATCCGCTCGAAGTTGCGCGGTTCTTCGGCGCCGGTAGAAGGCACCGGCAGTGCGCTGGAAGAGTCGGCCAACCAGGTTGCCGAAGCAAAGGAGGCATCGGCGGGAGAGGCTGCCCTTGCGGGGGATGATCGCGCTGCTGCATTGAAGGAACTGCAGGAGTTGCAGGGCCAGCTGGCCGAGCTACAGGGCGAGCATCCGCTGATCCTGGCCTCGGTCGACCAGCAGGCGGTGGGTTCGGTGGTCTCGGACTGGACCGGCATCCCGGTCGGTCGCATGGTCAAGAGCGAAGTCGAGACCGTGATGAACCTGGCCAAGCTGATGGGCCAGCGCGTCATCGGCCAGGACCACGCAATGGAGATGATCGCCAAGCGCATCCAGACCTCGCGTGCCGGCCTGGTCGACCCGAACAAGCCGATCGGCGTGTTCATGCTCGCCGGCACCTCCGGCGTGGGCAAGACCGAAACCGCGCTCGCGCTGGCCAGAACATCATCACCATCAACATGA
PROTEIN sequence
Length: 677
MAEISRGALFGKLNKLAFRCIESATVFCKLRGNPYVELVHWIHQILQLQDSDLHRIVKQFNLNPSNLARDITDALDRLPRGSSSISDLSSNVEEAVERGWVFATLMFGEAQVRTGYLIVGCLRTRNLRNALVNISAEFDKIKPEALVEKFAEVVGGSPEDGQHANDGFRMGGGSAPGEASGAMSPAQMGKQEALAQFTIDLTAQARDGKMDPIVGRDDEIRQLVDILMRRRQNNPMLVGEAGVGKTAVIEGFAMRIAIGDVPPPLKDVQLRVLDVGLLQAGASMKGEFENRLKQVIEEVQSSTKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKHIEKDPALTRRFQTVQIDEPSEEKAILMMRGVASVMEKHHKVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTACARVAISQHAVPAEVDDTRKRIQALETELGIIAREKNVGVNVTAREDAANEKLATQKARLETLEANWIKEKDLVEKILDIRSKLRGSSAPVEGTGSALEESANQVAEAKEASAGEAALAGDDRAAALKELQELQGQLAELQGEHPLILASVDQQAVGSVVSDWTGIPVGRMVKSEVETVMNLAKLMGQRVIGQDHAMEMIAKRIQTSRAGLVDPNKPIGVFMLAGTSGVGKTETALALARTSSPST*