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SCNpilot_expt_1000_bf_scaffold_1980_9

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 10573..11595

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 340.0
  • Bit_score: 607
  • Evalue 5.90e-171
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EIM02141.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 340.0
  • Bit_score: 607
  • Evalue 8.30e-171
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 340.0
  • Bit_score: 596
  • Evalue 4.30e-168
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGAAGGGCAAGGCCACATCGATCGACATTGCACACCTGGCCGGAGTGTCCCAGGCCACGGTCTCGCGCGCCCTGTGCGGCAGCCCGCTGGTCAATGAGGAAACCCGGCGGCGCGTGCAGGCCGCCGCCGAGCAACTCAACTACAAGCTCGACAAGAACGCCTCGAACCTGCGCCGGATGCATACCGGCACGCTGGCGCTGCTGTTCTTCGAGGACCCGACTGCCGACGAGTCGCACATCAACCCGTTCTTCCTGTCGATGCTCGGCTCGATCACCCGCGCCTGCGCCCTGCAGGGCCAGGACCTGCTGATCTCGTTCCAGCAGCTGTCCGACGACTGGCACGCCGACTTCGCCGACAGCAAGAAGGCCGATGGCCTGATCCTGCTCGGCTACGGCGACTACCTCGCCTACCGCGACAAGCTGGAAAAGCTCGTCGCGCAGGGCACCCGCTTCGTGCGCTGGGGCGCGGTGCTGCCGGACCAGCCCGGGGTGTCGTTCGGCAGCGACAACGTCTACGGCGGGCGGCAGGTGGCCGAGCACCTGCTCGAACGCGGCTGCCGGCGCATCGCCTTCCTCGGCGACGCCTCCAGCCATTACCCGGAGTTCTTCGGCCGTTACAACGGCTACGTCGACGCACTCACCGCCGCCGGCGTCGAGGTCGACCCCGCGCTGCAGGAGAACGCCGAGAGCACCGAACACTCCGGCTACGAGGCCATGCGCCGGCTGATCCTGCAGGAAGCCGGCTTCGATGCCGTGTTCGCCGCCAGCGACCTCATCGCGATCGGCGCCATGCGCGCGCTCAGCGACCACGGGCTGCGCGTGCCGCAGGACGTCGCCCTGGCCGGCTTCGACGACATCGCCACCGCCAGCTTCGTCAACCCGCCGTTGACCACCGTGCTGCAGGACACCGGCCAGGCCGGCGCGGTCCTGGTCGACAGCCTGCTCGGCCTGATCCGCGGCGAATCGGTGGAGAGTGAGGTGCTGCCGGTGAAGCTGATGGTGCGCAAGTCCAGCTTGCGCTGA
PROTEIN sequence
Length: 341
MKGKATSIDIAHLAGVSQATVSRALCGSPLVNEETRRRVQAAAEQLNYKLDKNASNLRRMHTGTLALLFFEDPTADESHINPFFLSMLGSITRACALQGQDLLISFQQLSDDWHADFADSKKADGLILLGYGDYLAYRDKLEKLVAQGTRFVRWGAVLPDQPGVSFGSDNVYGGRQVAEHLLERGCRRIAFLGDASSHYPEFFGRYNGYVDALTAAGVEVDPALQENAESTEHSGYEAMRRLILQEAGFDAVFAASDLIAIGAMRALSDHGLRVPQDVALAGFDDIATASFVNPPLTTVLQDTGQAGAVLVDSLLGLIRGESVESEVLPVKLMVRKSSLR*