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SCNpilot_expt_1000_bf_scaffold_1980_30

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(33178..33423)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator FtrA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ88_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 80.0
  • Bit_score: 128
  • Evalue 4.30e-27
ftrA; transcriptional activator FtrA similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 78.0
  • Bit_score: 102
  • Evalue 4.70e-20
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 85.0
  • Bit_score: 134
  • Evalue 5.00e-29

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGAGCGAACGCAGCTTCATGCGCCACTTCAGGCAGGCCACCGGCACCAGTCCGGTGCATTGGCTGATCGGCGCGCGAGTGGATCGTGCGCGCGAATTGCTGGAAAGCTCGACGCTCTCCATCGACGCGATTGCCGGGCAGTGCGGCTTCGGCAGCGCGATTACGCTGCGCCATCATTTCCGGCGCAAGCTGGCGATCAGCCCGGCGGCTTATCGGTCGCGCTTCGCGCAGCCACGCCACGGCTGA
PROTEIN sequence
Length: 82
MSERSFMRHFRQATGTSPVHWLIGARVDRARELLESSTLSIDAIAGQCGFGSAITLRHHFRRKLAISPAAYRSRFAQPRHG*