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SCNpilot_expt_1000_bf_scaffold_2256_20

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 20950..21387

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHZ5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 5.50e-33
GreA/GreB family elongation factor {ECO:0000313|EMBL:EIL99086.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 7.70e-33
transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 147
  • Evalue 3.00e-33

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGAGTCATTCAGCAATCACCGTGTCGCGCATCGACCTGGATCGCATCGAAGCCCTGCTGGAGCGGTTGCCGGCAGCCGAGGCCGACAAGCTGCAGGCGCTGCGCGCCGAGCTGGATCGCGCCGACGTGGTCGAGCCGGCGGACATGCCGCCGCACATCGTGACGATGAACTCCACCGTGGTCTTCGAAGATGAGTCCGACGGCGAAAAGCTGACCCTCACCCTGGTCTACCCGGCCGGCGCCGGTGCGCCCGGTACGGTCTCGATCCTCGCTGGCGCGCGGCCAGCAGATCGACTGGCCGATGCCCGACGGGCGCAAGCGCCGCCTGAAAGTGCTGGAGATCACCTACCAGCCCGAGGCCGCCGGCCACCTGCACCGCTGAGCGCCGCGCGCGCGGCGGGCGCACCGGCGGGTAGCGAAAATTCTCAGGGGAGATAA
PROTEIN sequence
Length: 146
MSHSAITVSRIDLDRIEALLERLPAAEADKLQALRAELDRADVVEPADMPPHIVTMNSTVVFEDESDGEKLTLTLVYPAGAGAPGTVSILAGARPADRLADARRAQAPPESAGDHLPARGRRPPAPLSAARAAGAPAGSENSQGR*