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SCNpilot_expt_1000_bf_scaffold_3009_7

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(6306..7685)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DbpA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ93_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 459.0
  • Bit_score: 841
  • Evalue 3.30e-241
  • rbh
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EIL89384.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 459.0
  • Bit_score: 841
  • Evalue 4.60e-241
DNA/RNA helicase, superfamily II similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 459.0
  • Bit_score: 804
  • Evalue 1.80e-230
  • rbh

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGACCGCCTTCAGCACCCTCCCGCTCAAACCCGCCCTGCTCGCCAGCGTCGACGCGCTTGGCTACACCGACATGACCCCGGTGCAGGCGCAGAGCCTGCCGCCGATGCTCGAAGGTCGCGACGTGATCGCGCAGGCGCAAACCGGCAGCGGCAAGACGGCGGCATTCGGCTTGAGCCTGCTGCAGGCACTGGACGTGGACACGATCCGGCTGCAGGCGCTGGTGCTCTGCCCCACCCGCGAACTGGCCGACCAGGTCAGCAAGGCGATCCGCAAGCTGGCCGCGAACATCCCCAACGTGAAGCTGCTGACCCTGTGCGGCGGCATGCCGCTGGGTCCGCAACTCGCCTCGCTGACGCACGACCCGCACATCGTGGTGGGCACGCCTGGCCGCGTGCAGGAACACCTGAAGCGGCAGAGCCTGCACGGCGGCGGCATCAAGGTGCTGGTGCTGGACGAGGCCGACCGCATGCTCGACATGGGTTTTGCCGAGGCGATCGACGACATCATCTCGCGCATCGCGAAGCACCATCAGACCCTGCTGTTTTCGGCCACGTACCCGGACGAGATCCGCGCGGTGAGCCAGCGCGTGCAGAACGATCCGGTTGAAGTGACGGTGGATGCGCCAGCCGACGCGAGGCCCGCGATCGAGCAGCGCTTCCACGAAGTGGAGCCGGCGCAGAAGCCCGATGCGCTGGCGCAGTTGCTGGCGGGCGAGCGGGGTGGGCAGGCACTGGTGTTCTGCAACATGCGCCGCGACGTCGACGCGGTGGCGCAGGAACTCGACCGCCGCGGCTACTCCGCGCTGGCCCTGCACGGCGACATGGAACAGCGCGACCGCGACGAGGTGCTGGTGCGCTTCGCCAACCACAGCTGCGCCGTGCTGGTGGCCACCGACGTGGCCGCGCGCGGGCTGGACATCGTGGCGCTGCCGCTGGTGGTCAGCTACGACGTCGCGCACGACCCGGAAACCCATACCCATCGCATCGGTCGCACCGGCCGCGCGGGCGAATCGGGCCTGGCGATCACCTTGTGCACGCCGCGCGAGCGGCCGAAGGCGGCGAACATCGAGGCGCTGAACGGGACGCCGCTGCCGTGGCGCCCGCTGAAGATCGCGCCGCCACGCGGCAAGGCCCTGCACCTGGCGCCGATGAAGACCCTGGTGATCGACGCCGGCCGCCAGGACAAGCTGCGCCCCGGCGACATCCTGGGCGCGCTCACCGGCGACGCGGGCCTCATCGCCGGGGACATCGGCAAGATCGACGTGTTCGCCACCCGCGCCTACGTGGCGATCAGCCGCGCGCTGGCCAACAAGGCGCTGGAGCGCCTGCGCGCCGGCAAGATCAAGGGCCGCAACTTCCGCGTGCGCGCGCTGAACTGA
PROTEIN sequence
Length: 460
MTAFSTLPLKPALLASVDALGYTDMTPVQAQSLPPMLEGRDVIAQAQTGSGKTAAFGLSLLQALDVDTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASLTHDPHIVVGTPGRVQEHLKRQSLHGGGIKVLVLDEADRMLDMGFAEAIDDIISRIAKHHQTLLFSATYPDEIRAVSQRVQNDPVEVTVDAPADARPAIEQRFHEVEPAQKPDALAQLLAGERGGQALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANHSCAVLVATDVAARGLDIVALPLVVSYDVAHDPETHTHRIGRTGRAGESGLAITLCTPRERPKAANIEALNGTPLPWRPLKIAPPRGKALHLAPMKTLVIDAGRQDKLRPGDILGALTGDAGLIAGDIGKIDVFATRAYVAISRALANKALERLRAGKIKGRNFRVRALN*