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SCNpilot_expt_1000_bf_scaffold_3009_9

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 8315..9571

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W350_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 409.0
  • Bit_score: 642
  • Evalue 3.50e-181
  • rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL93891.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 409.0
  • Bit_score: 642
  • Evalue 4.90e-181
putative mechanosensitive ion channel forming protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 405.0
  • Bit_score: 451
  • Evalue 3.60e-124
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCAGACCTTGCAGAACTTTCTCGACCTTCCCTGGATGCGCACCGCGCTGGGCGTCATCGCGCTGCTGGCGCTGGCCTGGCTTGCCGGTCAACTGGCGCAGCGACTGCTGCTGCGCGTGGTGCGCGGCATCGCCCGGCGCACGACCTGGAAATGGGATGACGCCCTGTTCCGGCGCCACACCTTCCAGTGGCTGGCGCGGATGGTGCCGGCACTGGCGATCCAGTACGGCATCATGCTGGTGCCGGGCGTATCGCCTCGTATCGAGGCGCTGGTCGGCAACCTGATGACGGCGTTGCTGGTGTTCTTCGTGGTGATGGCGATCAGTGCCGCGCTGTCGGCGCTGGAGGATCTCTACCGGGAGACCCCGCGCGGGCAGCAGCGATCGATCAAGGGCCTGGTGCAACTGGTGAAGCTCGGCCTGTTCGTCGTTGCCGGATTGATCATCATCGCGGCGGTCACCGGCAAGCACATTGGCCTGCTGCTGTCCGGGCTGGGCGCGATGTCGGCGGTGCTGATGCTGATCTTCAAGGACACCATCCTGGGCTTCGTGGCCGGCGTGCAGTTGTCGTCGAACGACATGCTGCGGGTCGGCGACTGGATCGAGATGCCGCAGCTCAATGCCGATGGCGACGTGATCGACATAGCGCTGCACACGGTCAAGGTGCGCAACTGGGACAAGACCATCACCAGCATCCCCAGCTGGCGCCTGATCAGCGACTCGTACAAGAACTGGCGCGGCATGCAGGAGACGGGCGGGCGGCGGATCAAGCGTGCGCTTTATATCGATGCGGCCAGCGTGCGCTTTCTCGATGCGGACACGCTGGGGCGGCTGGCCGAGTTGCGCCTGCTGGCCGACTACCTGCCCTCCAGGCAGCAGGAAGTGGCGCGGTGGAACGCAGCACTCGGCGAGGCCGGCGAAGTGGCCGGCAATCGTCGCCGGCTCACCAACCTGGGCACCTTCCGCGCCTATGCGCAGGCCTACCTCGACACTCATCCGGAAATCCACCACGGGCTGTTCTGCCTGGTGCGCCAGCTCGCCAGCGGCCCGCAGGGCATTCCGCTGGAGCTGTATTGCTTCACCGCCAGCGTGGCCTGGGCGGACTACGAGAACACCCAGAGCGATATCTTCGACCACCTGTTTGCGCTCCTGCCCGAGTTCGGCCTGGCGCTGTACCAGCAGCCGTCGGGGCAGGACGTGCGCGCCGCGCTGGCGTACCGGCAGGAACAGTCGCTACGCCTGGCGGCGGGTGGTTGA
PROTEIN sequence
Length: 419
MQTLQNFLDLPWMRTALGVIALLALAWLAGQLAQRLLLRVVRGIARRTTWKWDDALFRRHTFQWLARMVPALAIQYGIMLVPGVSPRIEALVGNLMTALLVFFVVMAISAALSALEDLYRETPRGQQRSIKGLVQLVKLGLFVVAGLIIIAAVTGKHIGLLLSGLGAMSAVLMLIFKDTILGFVAGVQLSSNDMLRVGDWIEMPQLNADGDVIDIALHTVKVRNWDKTITSIPSWRLISDSYKNWRGMQETGGRRIKRALYIDAASVRFLDADTLGRLAELRLLADYLPSRQQEVARWNAALGEAGEVAGNRRRLTNLGTFRAYAQAYLDTHPEIHHGLFCLVRQLASGPQGIPLELYCFTASVAWADYENTQSDIFDHLFALLPEFGLALYQQPSGQDVRAALAYRQEQSLRLAAGG*