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SCNpilot_expt_1000_bf_scaffold_3426_11

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 11300..11917

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal-dependent decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 188.0
  • Bit_score: 347
  • Evalue 8.70e-93
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EIM02929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 188.0
  • Bit_score: 347
  • Evalue 1.20e-92
PLP-dependent enzyme, glutamate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 188.0
  • Bit_score: 340
  • Evalue 4.40e-91

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGCACGCCGCCTTCGCCGCGCTGGGCGATACCGACTCGGCCACCGTCGACCCGCACAAGCTCGGCTACCTGCCCTACGGCTCGGGTGCCTTCGTCTGCCGCGACCACCGCGCGATGGCGCTGCTGGCCGAGCGCGCGGATTACGTATTCCACGGCGGCACGCCGAAGGATTACCTGGCGCGTTACCGCAGCCTCGGCCAGTTCATCCCGGAAGGTTCCAAATCCGGCGCCGCGGCGGCCGCGGTGTACGTCACGCACAAGGTGCTGCCGCTGGACCATGCCCACTTCGGCGCCCTGCCGCGTGCCACCGTGCGCGCCGCCGAGACCTTCCACGCGCGTGCGCAGCGCTTCGCGCTGGAGCTGGCCGACGGCGTGCACGCGCTGGTGCCGTTCGCGCCGGACAGCAACCTGGTCTGCCTCGCGCTCAACCCGCGCGGCAACACGTCGGTGGCGACGGCCAACTCCTTCGTGCGCGCGCTGCACGACGAACTGCGCTGCGATCCGCGCCAGCCACTGCAGACCAAGGAGTTCTTCGGCTCGGTGACCAGCCTGCGCGCATCTTTGCCGCACTCGGGCTGGACCCGGCCAGCTTCGTCGCCGACGACGACCGCCTGCTGA
PROTEIN sequence
Length: 206
VHAAFAALGDTDSATVDPHKLGYLPYGSGAFVCRDHRAMALLAERADYVFHGGTPKDYLARYRSLGQFIPEGSKSGAAAAAVYVTHKVLPLDHAHFGALPRATVRAAETFHARAQRFALELADGVHALVPFAPDSNLVCLALNPRGNTSVATANSFVRALHDELRCDPRQPLQTKEFFGSVTSLRASLPHSGWTRPASSPTTTAC*