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SCNpilot_expt_1000_bf_scaffold_4292_15

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(9696..10460)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 250.0
  • Bit_score: 421
  • Evalue 8.20e-115
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 250.0
  • Bit_score: 421
  • Evalue 5.90e-115
  • rbh
RNA methyltransferase, TrmH family, group 1 similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 251.0
  • Bit_score: 411
  • Evalue 1.90e-112
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGCCCGACACCGCCGACCTCGCTTCCCGCCTCCGCTTCGTGCTGGTGCGTACCTCGCACCCGGGCAACATCGGCAGCGCGGCACGGGCGATCCGCACGATGGGTTTCGCGCGGATGGAGCTGGTCAGCCCGGCACATTTCCCCGACCGCGAGGCGAACGCGCTGGCGGCCGGTGCCGATGAAGTGCTCGAGCATGCCGGCGTGCACGGCGAGCTGGTCGACGCGCTGGCCGGCTGCAGTTTCGCGCTGGGCCTTTCCGCGCGTCGGCGCGGCATCACCCTGCCGGAAATCGGGCCGCGCGAAGCCGCGCGACAGGCGCTGGCTGCCGCGCGGCGCGGCGAACAGGTGGCGCTGCTGTTCGGCAACGAGCGCAGCGGGCTGGCGAACGAGGAGCTGGCGCACTGCCACGCGATGGTGCGGATTCCCAGCGTGGACGATTTCAGCTCGCTCAACCTGTCGCAGGCGGTGCAGGTGATGGCGTACGAATTGCGCATGGCGGCCCTGGGCGACGAAGTGCCCGCACCACCGCCGGAGCACGACGAGCCGCTCGCCGACGCCGCCCTGATGGAACAGTTCTACCGCCATCTGGCGCAGACACTGGACGACATCGAGTTCCACAAGGGCCGCGAGCCGACGACGATCATGCTGCGCCTGCGCAAGCTGTTCCAGCGCGCCCAGCCGGACCAGCGCGAGTTGCGTGTGCTGCACGGCATCCTGGCCGATGCACAGCGCATGGCCGGTCTGGCGAAACGGCACGATCCGTAG
PROTEIN sequence
Length: 255
MPDTADLASRLRFVLVRTSHPGNIGSAARAIRTMGFARMELVSPAHFPDREANALAAGADEVLEHAGVHGELVDALAGCSFALGLSARRRGITLPEIGPREAARQALAAARRGEQVALLFGNERSGLANEELAHCHAMVRIPSVDDFSSLNLSQAVQVMAYELRMAALGDEVPAPPPEHDEPLADAALMEQFYRHLAQTLDDIEFHKGREPTTIMLRLRKLFQRAQPDQRELRVLHGILADAQRMAGLAKRHDP*